Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
LDLRAP1Q5SW96 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
LDLRAP1Q5SW96 AC010542.4-201ENST00000563151 1910 ntBASIC21.02■□□□□ 0.95
LDLRAP1Q5SW96 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
LDLRAP1Q5SW96 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDLRAP1Q5SW96 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDLRAP1Q5SW96 AP004607.4-201ENST00000530158 1459 ntBASIC21.01■□□□□ 0.95
LDLRAP1Q5SW96 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LDLRAP1Q5SW96 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.01■□□□□ 0.95
LDLRAP1Q5SW96 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LDLRAP1Q5SW96 AL162430.1-201ENST00000480705 870 ntBASIC21.01■□□□□ 0.95
LDLRAP1Q5SW96 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.01■□□□□ 0.95
LDLRAP1Q5SW96 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LDLRAP1Q5SW96 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDLRAP1Q5SW96 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDLRAP1Q5SW96 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 KRT18P5-201ENST00000436075 1291 ntBASIC21■□□□□ 0.95
LDLRAP1Q5SW96 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 EEF1DP3-203ENST00000566025 782 ntBASIC21■□□□□ 0.95
LDLRAP1Q5SW96 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 AC053503.5-201ENST00000601508 636 ntBASIC21■□□□□ 0.95
LDLRAP1Q5SW96 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 AC004854.2-201ENST00000608450 1441 ntBASIC21■□□□□ 0.95
LDLRAP1Q5SW96 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDLRAP1Q5SW96 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 AC007375.3-201ENST00000600936 2314 ntBASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.99■□□□□ 0.95
LDLRAP1Q5SW96 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LDLRAP1Q5SW96 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.98■□□□□ 0.95
LDLRAP1Q5SW96 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LDLRAP1Q5SW96 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LDLRAP1Q5SW96 KRT19P1-201ENST00000405746 1186 ntBASIC20.98■□□□□ 0.95
LDLRAP1Q5SW96 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.98■□□□□ 0.95
LDLRAP1Q5SW96 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.98■□□□□ 0.95
LDLRAP1Q5SW96 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LDLRAP1Q5SW96 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.98■□□□□ 0.95
LDLRAP1Q5SW96 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.98■□□□□ 0.95
LDLRAP1Q5SW96 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LDLRAP1Q5SW96 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LDLRAP1Q5SW96 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LDLRAP1Q5SW96 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LDLRAP1Q5SW96 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 SLC25A24-204ENST00000569674 2357 ntBASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.97■□□□□ 0.95
LDLRAP1Q5SW96 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAP1Q5SW96 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms