Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RFX4Q33E94 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RFX4Q33E94 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
RFX4Q33E94 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
RFX4Q33E94 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX4Q33E94 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.61■□□□□ 0.73
RFX4Q33E94 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RFX4Q33E94 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.61■□□□□ 0.73
RFX4Q33E94 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX4Q33E94 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFX4Q33E94 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RFX4Q33E94 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.61■□□□□ 0.73
RFX4Q33E94 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.61■□□□□ 0.73
RFX4Q33E94 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RFX4Q33E94 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFX4Q33E94 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.61■□□□□ 0.73
RFX4Q33E94 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFX4Q33E94 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.61■□□□□ 0.73
RFX4Q33E94 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.61■□□□□ 0.73
RFX4Q33E94 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX4Q33E94 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX4Q33E94 OR7E47P-201ENST00000546390 1422 ntBASIC19.6■□□□□ 0.73
RFX4Q33E94 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX4Q33E94 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX4Q33E94 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX4Q33E94 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFX4Q33E94 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.6■□□□□ 0.73
RFX4Q33E94 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RFX4Q33E94 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX4Q33E94 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX4Q33E94 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX4Q33E94 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX4Q33E94 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RFX4Q33E94 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFX4Q33E94 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.59■□□□□ 0.73
RFX4Q33E94 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFX4Q33E94 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFX4Q33E94 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RFX4Q33E94 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
RFX4Q33E94 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX4Q33E94 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RFX4Q33E94 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX4Q33E94 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX4Q33E94 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RFX4Q33E94 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX4Q33E94 AC007952.6-201ENST00000573168 2673 ntBASIC19.59■□□□□ 0.73
RFX4Q33E94 AC003957.1-201ENST00000625108 2673 ntBASIC19.59■□□□□ 0.73
RFX4Q33E94 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX4Q33E94 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFX4Q33E94 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX4Q33E94 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFX4Q33E94 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RFX4Q33E94 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RFX4Q33E94 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
RFX4Q33E94 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.58■□□□□ 0.73
RFX4Q33E94 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RFX4Q33E94 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.58■□□□□ 0.73
RFX4Q33E94 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX4Q33E94 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX4Q33E94 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX4Q33E94 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
RFX4Q33E94 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX4Q33E94 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX4Q33E94 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RFX4Q33E94 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.58■□□□□ 0.73
RFX4Q33E94 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
RFX4Q33E94 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RFX4Q33E94 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFX4Q33E94 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.58■□□□□ 0.72
RFX4Q33E94 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.58■□□□□ 0.72
RFX4Q33E94 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.58■□□□□ 0.72
RFX4Q33E94 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.58■□□□□ 0.72
RFX4Q33E94 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFX4Q33E94 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX4Q33E94 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX4Q33E94 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX4Q33E94 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFX4Q33E94 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX4Q33E94 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFX4Q33E94 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX4Q33E94 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RFX4Q33E94 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFX4Q33E94 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX4Q33E94 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFX4Q33E94 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RFX4Q33E94 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.57■□□□□ 0.72
RFX4Q33E94 AL031602.1-201ENST00000633169 911 ntBASIC19.57■□□□□ 0.72
RFX4Q33E94 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX4Q33E94 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX4Q33E94 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFX4Q33E94 AC133637.1-201ENST00000624115 1537 ntBASIC19.56■□□□□ 0.72
RFX4Q33E94 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFX4Q33E94 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFX4Q33E94 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RFX4Q33E94 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.56■□□□□ 0.72
RFX4Q33E94 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFX4Q33E94 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.56■□□□□ 0.72
RFX4Q33E94 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.56■□□□□ 0.72
RFX4Q33E94 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFX4Q33E94 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms