Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 YHR214C-DYHR214C-D 294 nt2.67□□□□□ -1.98
RRP40Q08285 AIM25YJR100C 984 nt2.67□□□□□ -1.98
RRP40Q08285 YAR069CYAR069C 294 nt2.67□□□□□ -1.98
RRP40Q08285 SAM37YMR060C 984 nt2.67□□□□□ -1.98
RRP40Q08285 YOR385WYOR385W 873 nt2.67□□□□□ -1.98
RRP40Q08285 YPR142CYPR142C 564 nt2.67□□□□□ -1.98
RRP40Q08285 MSB2YGR014W 3921 nt2.67□□□□□ -1.98
RRP40Q08285 MOT1YPL082C 5604 nt2.67□□□□□ -1.98
RRP40Q08285 CYR1YJL005W 6081 nt2.66□□□□□ -1.98
RRP40Q08285 YDL032WYDL032W 312 nt2.66□□□□□ -1.98
RRP40Q08285 YIL156W-AYIL156W-A 402 nt2.66□□□□□ -1.98
RRP40Q08285 USB1YLR132C 873 nt2.66□□□□□ -1.98
RRP40Q08285 GLO1YML004C 981 nt2.66□□□□□ -1.98
RRP40Q08285 YNL035CYNL035C 1170 nt2.66□□□□□ -1.98
RRP40Q08285 RPL33AYPL143W 324 nt2.66□□□□□ -1.98
RRP40Q08285 MDV1YJL112W 2145 nt2.66□□□□□ -1.98
RRP40Q08285 PRP8YHR165C 7242 nt2.66□□□□□ -1.98
RRP40Q08285 BPT1YLL015W 4680 nt2.66□□□□□ -1.98
RRP40Q08285 VIP1YLR410W 3441 nt2.65□□□□□ -1.99
RRP40Q08285 NHP10YDL002C 612 nt2.65□□□□□ -1.99
RRP40Q08285 ISC10YER180C 804 nt2.65□□□□□ -1.99
RRP40Q08285 KEG1YFR042W 603 nt2.65□□□□□ -1.99
RRP40Q08285 PNC1YGL037C 651 nt2.65□□□□□ -1.99
RRP40Q08285 YGR190CYGR190C 366 nt2.65□□□□□ -1.99
RRP40Q08285 MRPL6YHR147C 645 nt2.65□□□□□ -1.99
RRP40Q08285 SWD2YKL018W 990 nt2.65□□□□□ -1.99
RRP40Q08285 YLR311CYLR311C 348 nt2.65□□□□□ -1.99
RRP40Q08285 AAH1YNL141W 1044 nt2.65□□□□□ -1.99
RRP40Q08285 YCL001W-AYCL001W-A 462 nt2.65□□□□□ -1.99
RRP40Q08285 ORC1YML065W 2745 nt2.65□□□□□ -1.99
RRP40Q08285 CDC20YGL116W 1833 nt2.65□□□□□ -1.99
RRP40Q08285 RSM23YGL129C 1353 nt2.64□□□□□ -1.99
RRP40Q08285 SMC2YFR031C 3513 nt2.64□□□□□ -1.99
RRP40Q08285 RRP42YDL111C 798 nt2.64□□□□□ -1.99
RRP40Q08285 RPL35BYDL136W 363 nt2.64□□□□□ -1.99
RRP40Q08285 LRS4YDR439W 1044 nt2.64□□□□□ -1.99
RRP40Q08285 YDR491CYDR491C 492 nt2.64□□□□□ -1.99
RRP40Q08285 THO1YER063W 657 nt2.64□□□□□ -1.99
RRP40Q08285 RRT13YER066W 558 nt2.64□□□□□ -1.99
RRP40Q08285 YGL218WYGL218W 651 nt2.64□□□□□ -1.99
RRP40Q08285 YLR290CYLR290C 834 nt2.64□□□□□ -1.99
RRP40Q08285 YLR339CYLR339C 552 nt2.64□□□□□ -1.99
RRP40Q08285 YML037CYML037C 1023 nt2.64□□□□□ -1.99
RRP40Q08285 YML047W-AYML047W-A 366 nt2.64□□□□□ -1.99
RRP40Q08285 SSN8YNL025C 972 nt2.64□□□□□ -1.99
RRP40Q08285 RSM19YNR037C 276 nt2.64□□□□□ -1.99
RRP40Q08285 RPS10AYOR293W 318 nt2.64□□□□□ -1.99
RRP40Q08285 RPS12YOR369C 432 nt2.64□□□□□ -1.99
RRP40Q08285 CEP3YMR168C 1827 nt2.63□□□□□ -1.99
RRP40Q08285 ECM18YDR125C 1362 nt2.63□□□□□ -1.99
RRP40Q08285 DUF1YOL087C 3351 nt2.63□□□□□ -1.99
RRP40Q08285 RPN4YDL020C 1596 nt2.63□□□□□ -1.99
RRP40Q08285 RAD55YDR076W 1221 nt2.63□□□□□ -1.99
RRP40Q08285 YDR209CYDR209C 414 nt2.63□□□□□ -1.99
RRP40Q08285 YGR064WYGR064W 369 nt2.63□□□□□ -1.99
RRP40Q08285 YHR097CYHR097C 1101 nt2.63□□□□□ -1.99
RRP40Q08285 SOL3YHR163W 750 nt2.63□□□□□ -1.99
RRP40Q08285 EBP2YKL172W 1284 nt2.63□□□□□ -1.99
RRP40Q08285 REC102YLR329W 795 nt2.63□□□□□ -1.99
RRP40Q08285 TRM112YNR046W 408 nt2.63□□□□□ -1.99
RRP40Q08285 MSN1YOL116W 1149 nt2.63□□□□□ -1.99
RRP40Q08285 YBR116CYBR116C 528 nt2.63□□□□□ -1.99
RRP40Q08285 REG1YDR028C 3045 nt2.63□□□□□ -1.99
RRP40Q08285 GYP7YDL234C 2241 nt2.62□□□□□ -1.99
RRP40Q08285 NFT1YKR103W 3657 nt2.62□□□□□ -1.99
RRP40Q08285 YML096WYML096W 1578 nt2.62□□□□□ -1.99
RRP40Q08285 TSC13YDL015C 933 nt2.62□□□□□ -1.99
RRP40Q08285 AIM11YER093C-A 414 nt2.62□□□□□ -1.99
RRP40Q08285 NSA2YER126C 786 nt2.62□□□□□ -1.99
RRP40Q08285 PTI1YGR156W 1278 nt2.62□□□□□ -1.99
RRP40Q08285 RDN58-1RDN58-1 158 nt2.62□□□□□ -1.99
RRP40Q08285 RDN58-2RDN58-2 158 nt2.62□□□□□ -1.99
RRP40Q08285 YBL028CYBL028C 321 nt2.62□□□□□ -1.99
RRP40Q08285 ATG3YNR007C 933 nt2.62□□□□□ -1.99
RRP40Q08285 YNR062CYNR062C 984 nt2.62□□□□□ -1.99
RRP40Q08285 YOR331CYOR331C 558 nt2.62□□□□□ -1.99
RRP40Q08285 PPT2YPL148C 522 nt2.62□□□□□ -1.99
RRP40Q08285 AFT2YPL202C 1251 nt2.62□□□□□ -1.99
RRP40Q08285 PKP2YGL059W 1476 nt2.62□□□□□ -1.99
RRP40Q08285 ADY4YLR227C 1482 nt2.62□□□□□ -1.99
RRP40Q08285 CHS3YBR023C 3498 nt2.62□□□□□ -1.99
RRP40Q08285 TOM1YDR457W 9807 nt2.61□□□□□ -1.99
RRP40Q08285 SWC4YGR002C 1431 nt2.61□□□□□ -1.99
RRP40Q08285 FRE8YLR047C 2061 nt2.61□□□□□ -1.99
RRP40Q08285 ARF1YDL192W 546 nt2.61□□□□□ -1.99
RRP40Q08285 YGL258W-AYGL258W-A 234 nt2.61□□□□□ -1.99
RRP40Q08285 YGR039WYGR039W 312 nt2.61□□□□□ -1.99
RRP40Q08285 YIL024CYIL024C 570 nt2.61□□□□□ -1.99
RRP40Q08285 PCL7YIL050W 858 nt2.61□□□□□ -1.99
RRP40Q08285 VMA5YKL080W 1179 nt2.61□□□□□ -1.99
RRP40Q08285 YKL156C-AYKL156C-A 117 nt2.61□□□□□ -1.99
RRP40Q08285 YNL184CYNL184C 327 nt2.61□□□□□ -1.99
RRP40Q08285 snR11snR11 258 nt2.61□□□□□ -1.99
RRP40Q08285 PFY1YOR122C 381 nt2.61□□□□□ -1.99
RRP40Q08285 ESC1YMR219W 4977 nt2.61□□□□□ -1.99
RRP40Q08285 KIN82YCR091W 2163 nt2.61□□□□□ -1.99
RRP40Q08285 MSH2YOL090W 2895 nt2.61□□□□□ -1.99
RRP40Q08285 YPL216WYPL216W 3309 nt2.61□□□□□ -1.99
RRP40Q08285 CDC55YGL190C 1581 nt2.61□□□□□ -1.99
RRP40Q08285 SAP1YER047C 2694 nt2.6□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 18.4 ms