Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 NDC80YIL144W 2076 nt3.22□□□□□ -1.89
RPN9Q04062 SPO71YDR104C 3738 nt3.22□□□□□ -1.89
RPN9Q04062 RTG3YBL103C 1461 nt3.22□□□□□ -1.89
RPN9Q04062 COM2YER130C 1332 nt3.21□□□□□ -1.89
RPN9Q04062 YEL075CYEL075C 369 nt3.21□□□□□ -1.9
RPN9Q04062 PUG1YER185W 912 nt3.21□□□□□ -1.9
RPN9Q04062 YGR039WYGR039W 312 nt3.21□□□□□ -1.9
RPN9Q04062 ERG25YGR060W 930 nt3.21□□□□□ -1.9
RPN9Q04062 PAU13YHL046C 363 nt3.21□□□□□ -1.9
RPN9Q04062 AGE2YIL044C 897 nt3.21□□□□□ -1.9
RPN9Q04062 YIR040CYIR040C 333 nt3.21□□□□□ -1.9
RPN9Q04062 VMA5YKL080W 1179 nt3.21□□□□□ -1.9
RPN9Q04062 HHF2YNL030W 312 nt3.21□□□□□ -1.9
RPN9Q04062 YOR062CYOR062C 807 nt3.21□□□□□ -1.9
RPN9Q04062 POL30YBR088C 777 nt3.21□□□□□ -1.9
RPN9Q04062 ARO4YBR249C 1113 nt3.21□□□□□ -1.9
RPN9Q04062 GCD2YGR083C 1956 nt3.21□□□□□ -1.9
RPN9Q04062 VPS9YML097C 1356 nt3.21□□□□□ -1.9
RPN9Q04062 PSP1YDR505C 2526 nt3.21□□□□□ -1.9
RPN9Q04062 SMC3YJL074C 3693 nt3.21□□□□□ -1.9
RPN9Q04062 MIT1YEL007W 2001 nt3.2□□□□□ -1.9
RPN9Q04062 YSP2YDR326C 4317 nt3.2□□□□□ -1.9
RPN9Q04062 YCR100CYCR100C 951 nt3.2□□□□□ -1.9
RPN9Q04062 ARF1YDL192W 546 nt3.2□□□□□ -1.9
RPN9Q04062 YDR090CYDR090C 933 nt3.2□□□□□ -1.9
RPN9Q04062 RGI1YER067W 486 nt3.2□□□□□ -1.9
RPN9Q04062 MPS2YGL075C 1164 nt3.2□□□□□ -1.9
RPN9Q04062 AIM25YJR100C 984 nt3.2□□□□□ -1.9
RPN9Q04062 CCE1YKL011C 1062 nt3.2□□□□□ -1.9
RPN9Q04062 YNL319WYNL319W 441 nt3.2□□□□□ -1.9
RPN9Q04062 PEX15YOL044W 1152 nt3.2□□□□□ -1.9
RPN9Q04062 HAT1YPL001W 1125 nt3.2□□□□□ -1.9
RPN9Q04062 CHA4YLR098C 1947 nt3.2□□□□□ -1.9
RPN9Q04062 YDL176WYDL176W 2127 nt3.2□□□□□ -1.9
RPN9Q04062 VTC4YJL012C 2166 nt3.19□□□□□ -1.9
RPN9Q04062 THO1YER063W 657 nt3.19□□□□□ -1.9
RPN9Q04062 YGL242CYGL242C 546 nt3.19□□□□□ -1.9
RPN9Q04062 RPL24BYGR148C 468 nt3.19□□□□□ -1.9
RPN9Q04062 RFA3YJL173C 369 nt3.19□□□□□ -1.9
RPN9Q04062 YKL156C-AYKL156C-A 117 nt3.19□□□□□ -1.9
RPN9Q04062 YNL184CYNL184C 327 nt3.19□□□□□ -1.9
RPN9Q04062 MRPL17YNL252C 846 nt3.19□□□□□ -1.9
RPN9Q04062 RPA43YOR340C 981 nt3.19□□□□□ -1.9
RPN9Q04062 YBR053CYBR053C 1077 nt3.19□□□□□ -1.9
RPN9Q04062 snR42snR42 351 nt3.19□□□□□ -1.9
RPN9Q04062 SPT14YPL175W 1359 nt3.19□□□□□ -1.9
RPN9Q04062 NOP4YPL043W 2058 nt3.18□□□□□ -1.9
RPN9Q04062 HSE1YHL002W 1359 nt3.18□□□□□ -1.9
RPN9Q04062 YDL157CYDL157C 357 nt3.18□□□□□ -1.9
RPN9Q04062 PAU10YDR542W 363 nt3.18□□□□□ -1.9
RPN9Q04062 YFR010W-AYFR010W-A 189 nt3.18□□□□□ -1.9
RPN9Q04062 BRR6YGL247W 594 nt3.18□□□□□ -1.9
RPN9Q04062 PAU11YGL261C 363 nt3.18□□□□□ -1.9
RPN9Q04062 YKL131WYKL131W 522 nt3.18□□□□□ -1.9
RPN9Q04062 RPS21AYKR057W 264 nt3.18□□□□□ -1.9
RPN9Q04062 YLR366WYLR366W 306 nt3.18□□□□□ -1.9
RPN9Q04062 PAU4YLR461W 363 nt3.18□□□□□ -1.9
RPN9Q04062 YMR158C-AYMR158C-A 138 nt3.18□□□□□ -1.9
RPN9Q04062 AAR2YBL074C 1068 nt3.18□□□□□ -1.9
RPN9Q04062 YNL226WYNL226W 411 nt3.18□□□□□ -1.9
RPN9Q04062 YOR203WYOR203W 354 nt3.18□□□□□ -1.9
RPN9Q04062 DNM1YLL001W 2274 nt3.18□□□□□ -1.9
RPN9Q04062 SLY41YOR307C 1362 nt3.17□□□□□ -1.9
RPN9Q04062 DPP1YDR284C 870 nt3.17□□□□□ -1.9
RPN9Q04062 AIM11YER093C-A 414 nt3.17□□□□□ -1.9
RPN9Q04062 YGL082WYGL082W 1146 nt3.17□□□□□ -1.9
RPN9Q04062 YKR070WYKR070W 1059 nt3.17□□□□□ -1.9
RPN9Q04062 YLR169WYLR169W 354 nt3.17□□□□□ -1.9
RPN9Q04062 NNT1YLR285W 786 nt3.17□□□□□ -1.9
RPN9Q04062 RPN13YLR421C 471 nt3.17□□□□□ -1.9
RPN9Q04062 SPC2YML055W 537 nt3.17□□□□□ -1.9
RPN9Q04062 BET5YML077W 480 nt3.17□□□□□ -1.9
RPN9Q04062 SRT1YMR101C 1032 nt3.17□□□□□ -1.9
RPN9Q04062 YBL055CYBL055C 1257 nt3.17□□□□□ -1.9
RPN9Q04062 RSM19YNR037C 276 nt3.17□□□□□ -1.9
RPN9Q04062 YBR116CYBR116C 528 nt3.17□□□□□ -1.9
RPN9Q04062 YMR317WYMR317W 3423 nt3.17□□□□□ -1.9
RPN9Q04062 RPA190YOR341W 4995 nt3.17□□□□□ -1.9
RPN9Q04062 DOA4YDR069C 2781 nt3.17□□□□□ -1.9
RPN9Q04062 YPR022CYPR022C 3402 nt3.16□□□□□ -1.9
RPN9Q04062 CDC40YDR364C 1368 nt3.16□□□□□ -1.9
RPN9Q04062 REG1YDR028C 3045 nt3.16□□□□□ -1.9
RPN9Q04062 DTD1YDL219W 453 nt3.16□□□□□ -1.9
RPN9Q04062 AI3Q0060 1248 nt3.16□□□□□ -1.9
RPN9Q04062 YDR491CYDR491C 492 nt3.16□□□□□ -1.9
RPN9Q04062 YFR057WYFR057W 456 nt3.16□□□□□ -1.9
RPN9Q04062 YGL041W-AYGL041W-A 465 nt3.16□□□□□ -1.9
RPN9Q04062 COX23YHR116W 456 nt3.16□□□□□ -1.9
RPN9Q04062 SDP1YIL113W 630 nt3.16□□□□□ -1.9
RPN9Q04062 YLR339CYLR339C 552 nt3.16□□□□□ -1.9
RPN9Q04062 YLR400WYLR400W 474 nt3.16□□□□□ -1.9
RPN9Q04062 YBL065WYBL065W 345 nt3.16□□□□□ -1.9
RPN9Q04062 SFG1YOR315W 1041 nt3.16□□□□□ -1.9
RPN9Q04062 CMD1YBR109C 444 nt3.16□□□□□ -1.9
RPN9Q04062 APD1YBR151W 951 nt3.16□□□□□ -1.9
RPN9Q04062 SAD1YFR005C 1347 nt3.16□□□□□ -1.9
RPN9Q04062 RIF1YBR275C 5751 nt3.15□□□□□ -1.9
RPN9Q04062 RUB1YDR139C 234 nt3.15□□□□□ -1.91
RPN9Q04062 YDR320W-BYDR320W-B 138 nt3.15□□□□□ -1.91
RPN9Q04062 YGL218WYGL218W 651 nt3.15□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 37.8 ms