Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDKL1Q00532 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDKL1Q00532 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
CDKL1Q00532 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CDKL1Q00532 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL1Q00532 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.76■□□□□ 0.91
CDKL1Q00532 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL1Q00532 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL1Q00532 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.76■□□□□ 0.91
CDKL1Q00532 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.76■□□□□ 0.91
CDKL1Q00532 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL1Q00532 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL1Q00532 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.76■□□□□ 0.91
CDKL1Q00532 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.76■□□□□ 0.91
CDKL1Q00532 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDKL1Q00532 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL1Q00532 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL1Q00532 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL1Q00532 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.75■□□□□ 0.91
CDKL1Q00532 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL1Q00532 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL1Q00532 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL1Q00532 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDKL1Q00532 AC142381.2-201ENST00000566120 298 ntBASIC20.75■□□□□ 0.91
CDKL1Q00532 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
CDKL1Q00532 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.75■□□□□ 0.91
CDKL1Q00532 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.75■□□□□ 0.91
CDKL1Q00532 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL1Q00532 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL1Q00532 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.75■□□□□ 0.91
CDKL1Q00532 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.75■□□□□ 0.91
CDKL1Q00532 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL1Q00532 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CDKL1Q00532 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL1Q00532 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL1Q00532 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.75■□□□□ 0.91
CDKL1Q00532 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL1Q00532 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL1Q00532 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDKL1Q00532 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL1Q00532 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.74■□□□□ 0.91
CDKL1Q00532 BX005040.4-201ENST00000637145 1518 ntBASIC20.74■□□□□ 0.91
CDKL1Q00532 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL1Q00532 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL1Q00532 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL1Q00532 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CDKL1Q00532 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL1Q00532 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL1Q00532 Z98882.1-201ENST00000622160 2253 ntBASIC20.74■□□□□ 0.91
CDKL1Q00532 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL1Q00532 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.74■□□□□ 0.91
CDKL1Q00532 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
CDKL1Q00532 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL1Q00532 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL1Q00532 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CDKL1Q00532 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.73■□□□□ 0.91
CDKL1Q00532 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.73■□□□□ 0.91
CDKL1Q00532 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.73■□□□□ 0.91
CDKL1Q00532 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.73■□□□□ 0.91
CDKL1Q00532 AC012414.1-201ENST00000556676 535 ntBASIC20.73■□□□□ 0.91
CDKL1Q00532 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.73■□□□□ 0.91
CDKL1Q00532 AC005837.3-201ENST00000612163 286 ntBASIC20.73■□□□□ 0.91
CDKL1Q00532 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL1Q00532 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.73■□□□□ 0.91
CDKL1Q00532 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL1Q00532 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.73■□□□□ 0.91
CDKL1Q00532 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.73■□□□□ 0.91
CDKL1Q00532 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL1Q00532 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL1Q00532 AC055733.4-201ENST00000638462 1354 ntBASIC20.72■□□□□ 0.91
CDKL1Q00532 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL1Q00532 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDKL1Q00532 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL1Q00532 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL1Q00532 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL1Q00532 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL1Q00532 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL1Q00532 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
CDKL1Q00532 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL1Q00532 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL1Q00532 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL1Q00532 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
CDKL1Q00532 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.72■□□□□ 0.91
CDKL1Q00532 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.72■□□□□ 0.91
CDKL1Q00532 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.72■□□□□ 0.91
CDKL1Q00532 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CDKL1Q00532 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.72■□□□□ 0.91
CDKL1Q00532 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL1Q00532 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.72■□□□□ 0.91
CDKL1Q00532 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.72■□□□□ 0.91
CDKL1Q00532 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL1Q00532 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL1Q00532 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CDKL1Q00532 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.71■□□□□ 0.91
CDKL1Q00532 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL1Q00532 AC005224.4-201ENST00000583262 1652 ntBASIC20.71■□□□□ 0.91
CDKL1Q00532 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.71■□□□□ 0.91
CDKL1Q00532 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL1Q00532 AL354811.1-201ENST00000610286 706 ntBASIC20.71■□□□□ 0.91
CDKL1Q00532 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms