Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SRPXP78539 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPXP78539 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPXP78539 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPXP78539 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SRPXP78539 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.39■□□□□ 0.37
SRPXP78539 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.39■□□□□ 0.37
SRPXP78539 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.39■□□□□ 0.37
SRPXP78539 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.39■□□□□ 0.37
SRPXP78539 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPXP78539 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPXP78539 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.39■□□□□ 0.37
SRPXP78539 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SRPXP78539 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.39■□□□□ 0.37
SRPXP78539 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.39■□□□□ 0.37
SRPXP78539 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPXP78539 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPXP78539 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPXP78539 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPXP78539 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPXP78539 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
SRPXP78539 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPXP78539 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPXP78539 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRPXP78539 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPXP78539 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPXP78539 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPXP78539 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPXP78539 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.38■□□□□ 0.37
SRPXP78539 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.38■□□□□ 0.37
SRPXP78539 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.38■□□□□ 0.37
SRPXP78539 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.38■□□□□ 0.37
SRPXP78539 AC092028.1-203ENST00000608262 953 ntBASIC17.38■□□□□ 0.37
SRPXP78539 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.38■□□□□ 0.37
SRPXP78539 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SRPXP78539 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPXP78539 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPXP78539 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPXP78539 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
SRPXP78539 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
SRPXP78539 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRPXP78539 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.38■□□□□ 0.37
SRPXP78539 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.38■□□□□ 0.37
SRPXP78539 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRPXP78539 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRPXP78539 KRT8P33-201ENST00000508125 1423 ntBASIC17.38■□□□□ 0.37
SRPXP78539 AC133637.1-201ENST00000624115 1537 ntBASIC17.37■□□□□ 0.37
SRPXP78539 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRPXP78539 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SRPXP78539 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPXP78539 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
SRPXP78539 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRPXP78539 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SRPXP78539 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPXP78539 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SRPXP78539 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.37■□□□□ 0.37
SRPXP78539 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.37■□□□□ 0.37
SRPXP78539 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPXP78539 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.37■□□□□ 0.37
SRPXP78539 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPXP78539 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPXP78539 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.37■□□□□ 0.37
SRPXP78539 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRPXP78539 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRPXP78539 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRPXP78539 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRPXP78539 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SRPXP78539 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.36■□□□□ 0.37
SRPXP78539 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SRPXP78539 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.36■□□□□ 0.37
SRPXP78539 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SRPXP78539 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.36■□□□□ 0.37
SRPXP78539 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SRPXP78539 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.36■□□□□ 0.37
SRPXP78539 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SRPXP78539 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SRPXP78539 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.35■□□□□ 0.37
SRPXP78539 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SRPXP78539 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms