Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NKX6-1P78426 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX6-1P78426 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NKX6-1P78426 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NKX6-1P78426 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX6-1P78426 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NKX6-1P78426 TSPY20P-201ENST00000450910 630 ntBASIC18.54■□□□□ 0.56
NKX6-1P78426 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.54■□□□□ 0.56
NKX6-1P78426 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NKX6-1P78426 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX6-1P78426 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX6-1P78426 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.54■□□□□ 0.56
NKX6-1P78426 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX6-1P78426 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NKX6-1P78426 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX6-1P78426 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX6-1P78426 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX6-1P78426 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NKX6-1P78426 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NKX6-1P78426 AC005224.4-201ENST00000583262 1652 ntBASIC18.54■□□□□ 0.56
NKX6-1P78426 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NKX6-1P78426 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NKX6-1P78426 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NKX6-1P78426 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NKX6-1P78426 AC127496.7-201ENST00000625110 1798 ntBASIC18.53■□□□□ 0.56
NKX6-1P78426 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.53■□□□□ 0.56
NKX6-1P78426 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NKX6-1P78426 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NKX6-1P78426 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NKX6-1P78426 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NKX6-1P78426 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NKX6-1P78426 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NKX6-1P78426 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
NKX6-1P78426 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NKX6-1P78426 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NKX6-1P78426 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.53■□□□□ 0.56
NKX6-1P78426 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.53■□□□□ 0.56
NKX6-1P78426 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.53■□□□□ 0.56
NKX6-1P78426 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NKX6-1P78426 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.53■□□□□ 0.56
NKX6-1P78426 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NKX6-1P78426 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.53■□□□□ 0.56
NKX6-1P78426 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NKX6-1P78426 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NKX6-1P78426 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NKX6-1P78426 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.52■□□□□ 0.56
NKX6-1P78426 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.52■□□□□ 0.56
NKX6-1P78426 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.52■□□□□ 0.56
NKX6-1P78426 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NKX6-1P78426 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NKX6-1P78426 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX6-1P78426 AL034346.1-201ENST00000568244 1277 ntBASIC18.52■□□□□ 0.56
NKX6-1P78426 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.52■□□□□ 0.56
NKX6-1P78426 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.52■□□□□ 0.56
NKX6-1P78426 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.52■□□□□ 0.56
NKX6-1P78426 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX6-1P78426 AP004607.7-201ENST00000527152 1677 ntBASIC18.52■□□□□ 0.56
NKX6-1P78426 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
NKX6-1P78426 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NKX6-1P78426 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NKX6-1P78426 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
NKX6-1P78426 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NKX6-1P78426 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX6-1P78426 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX6-1P78426 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX6-1P78426 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX6-1P78426 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.51■□□□□ 0.55
NKX6-1P78426 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NKX6-1P78426 AL121832.2-201ENST00000610979 668 ntBASIC18.51■□□□□ 0.55
NKX6-1P78426 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX6-1P78426 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX6-1P78426 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NKX6-1P78426 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX6-1P78426 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX6-1P78426 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NKX6-1P78426 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX6-1P78426 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX6-1P78426 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NKX6-1P78426 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NKX6-1P78426 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX6-1P78426 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.5■□□□□ 0.55
NKX6-1P78426 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX6-1P78426 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX6-1P78426 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NKX6-1P78426 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NKX6-1P78426 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.5■□□□□ 0.55
NKX6-1P78426 AC079140.4-201ENST00000507448 529 ntBASIC18.5■□□□□ 0.55
NKX6-1P78426 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.5■□□□□ 0.55
NKX6-1P78426 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NKX6-1P78426 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.5■□□□□ 0.55
NKX6-1P78426 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NKX6-1P78426 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX6-1P78426 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX6-1P78426 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.5■□□□□ 0.55
NKX6-1P78426 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NKX6-1P78426 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX6-1P78426 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NKX6-1P78426 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX6-1P78426 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NKX6-1P78426 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms