Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS3P61009 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS3P61009 OR2I1P-207ENST00000453522 948 ntBASIC17.12■□□□□ 0.33
SPCS3P61009 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS3P61009 AC010141.3-201ENST00000456659 717 ntBASIC17.12■□□□□ 0.33
SPCS3P61009 RARRES2P1-201ENST00000474487 481 ntBASIC17.12■□□□□ 0.33
SPCS3P61009 AL034346.1-201ENST00000568244 1277 ntBASIC17.12■□□□□ 0.33
SPCS3P61009 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.12■□□□□ 0.33
SPCS3P61009 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.12■□□□□ 0.33
SPCS3P61009 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS3P61009 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS3P61009 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS3P61009 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SPCS3P61009 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.12■□□□□ 0.33
SPCS3P61009 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
SPCS3P61009 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS3P61009 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SPCS3P61009 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS3P61009 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.11■□□□□ 0.33
SPCS3P61009 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SPCS3P61009 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS3P61009 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.11■□□□□ 0.33
SPCS3P61009 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS3P61009 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.11■□□□□ 0.33
SPCS3P61009 AC099791.2-201ENST00000605725 427 ntBASIC17.11■□□□□ 0.33
SPCS3P61009 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.11■□□□□ 0.33
SPCS3P61009 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS3P61009 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS3P61009 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS3P61009 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.11■□□□□ 0.33
SPCS3P61009 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SPCS3P61009 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS3P61009 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.11■□□□□ 0.33
SPCS3P61009 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SPCS3P61009 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPCS3P61009 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.11■□□□□ 0.33
SPCS3P61009 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.11■□□□□ 0.33
SPCS3P61009 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPCS3P61009 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPCS3P61009 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.1■□□□□ 0.33
SPCS3P61009 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPCS3P61009 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPCS3P61009 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SPCS3P61009 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.1■□□□□ 0.33
SPCS3P61009 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.1■□□□□ 0.33
SPCS3P61009 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.1■□□□□ 0.33
SPCS3P61009 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.1■□□□□ 0.33
SPCS3P61009 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.1■□□□□ 0.33
SPCS3P61009 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPCS3P61009 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPCS3P61009 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.1■□□□□ 0.33
SPCS3P61009 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPCS3P61009 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.1■□□□□ 0.33
SPCS3P61009 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPCS3P61009 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.1■□□□□ 0.33
SPCS3P61009 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPCS3P61009 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPCS3P61009 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPCS3P61009 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPCS3P61009 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPCS3P61009 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPCS3P61009 MIR3181-201ENST00000578512 73 ntBASIC17.09■□□□□ 0.33
SPCS3P61009 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SPCS3P61009 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPCS3P61009 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.09■□□□□ 0.33
SPCS3P61009 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.09■□□□□ 0.33
SPCS3P61009 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.09■□□□□ 0.33
SPCS3P61009 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
SPCS3P61009 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.09■□□□□ 0.33
SPCS3P61009 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.09■□□□□ 0.33
SPCS3P61009 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.09■□□□□ 0.33
SPCS3P61009 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SPCS3P61009 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPCS3P61009 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SPCS3P61009 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPCS3P61009 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SPCS3P61009 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.08■□□□□ 0.33
SPCS3P61009 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPCS3P61009 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.08■□□□□ 0.33
SPCS3P61009 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SPCS3P61009 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPCS3P61009 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPCS3P61009 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPCS3P61009 KRT16P3-201ENST00000439127 1283 ntBASIC17.08■□□□□ 0.32
SPCS3P61009 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.08■□□□□ 0.32
SPCS3P61009 AL356740.2-201ENST00000601559 647 ntBASIC17.08■□□□□ 0.32
SPCS3P61009 AC092171.4-201ENST00000609130 632 ntBASIC17.08■□□□□ 0.32
SPCS3P61009 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPCS3P61009 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPCS3P61009 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPCS3P61009 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.08■□□□□ 0.32
SPCS3P61009 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.08■□□□□ 0.32
SPCS3P61009 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.08■□□□□ 0.32
SPCS3P61009 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.08■□□□□ 0.32
SPCS3P61009 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.08■□□□□ 0.32
SPCS3P61009 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPCS3P61009 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.08■□□□□ 0.32
SPCS3P61009 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPCS3P61009 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.07■□□□□ 0.32
SPCS3P61009 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms