Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S2P56377 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S2P56377 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S2P56377 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S2P56377 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
AP1S2P56377 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S2P56377 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S2P56377 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.59■□□□□ 0.89
AP1S2P56377 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S2P56377 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S2P56377 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
AP1S2P56377 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
AP1S2P56377 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.59■□□□□ 0.89
AP1S2P56377 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S2P56377 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.59■□□□□ 0.89
AP1S2P56377 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP1S2P56377 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP1S2P56377 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP1S2P56377 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.58■□□□□ 0.89
AP1S2P56377 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP1S2P56377 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP1S2P56377 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP1S2P56377 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
AP1S2P56377 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
AP1S2P56377 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.58■□□□□ 0.89
AP1S2P56377 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.58■□□□□ 0.89
AP1S2P56377 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.58■□□□□ 0.89
AP1S2P56377 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.58■□□□□ 0.89
AP1S2P56377 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.58■□□□□ 0.89
AP1S2P56377 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
AP1S2P56377 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.58■□□□□ 0.89
AP1S2P56377 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.58■□□□□ 0.88
AP1S2P56377 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.58■□□□□ 0.88
AP1S2P56377 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP1S2P56377 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
AP1S2P56377 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP1S2P56377 LINC02228-203ENST00000641970 1355 ntBASIC20.58■□□□□ 0.88
AP1S2P56377 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP1S2P56377 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
AP1S2P56377 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP1S2P56377 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP1S2P56377 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP1S2P56377 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
AP1S2P56377 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
AP1S2P56377 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.57■□□□□ 0.88
AP1S2P56377 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP1S2P56377 AC123595.1-201ENST00000440769 1046 ntBASIC20.57■□□□□ 0.88
AP1S2P56377 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
AP1S2P56377 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP1S2P56377 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP1S2P56377 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.57■□□□□ 0.88
AP1S2P56377 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S2P56377 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S2P56377 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S2P56377 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S2P56377 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.56■□□□□ 0.88
AP1S2P56377 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.56■□□□□ 0.88
AP1S2P56377 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S2P56377 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
AP1S2P56377 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.55■□□□□ 0.88
AP1S2P56377 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
AP1S2P56377 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.55■□□□□ 0.88
AP1S2P56377 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 YBX1P1-201ENST00000445822 960 ntBASIC20.55■□□□□ 0.88
AP1S2P56377 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
AP1S2P56377 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.55■□□□□ 0.88
AP1S2P56377 AC079140.4-201ENST00000507448 529 ntBASIC20.55■□□□□ 0.88
AP1S2P56377 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 EEF1DP3-203ENST00000566025 782 ntBASIC20.55■□□□□ 0.88
AP1S2P56377 AC053503.5-201ENST00000601508 636 ntBASIC20.55■□□□□ 0.88
AP1S2P56377 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.55■□□□□ 0.88
AP1S2P56377 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.55■□□□□ 0.88
AP1S2P56377 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S2P56377 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.55■□□□□ 0.88
AP1S2P56377 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.54■□□□□ 0.88
AP1S2P56377 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.54■□□□□ 0.88
AP1S2P56377 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S2P56377 FEM1AP4-201ENST00000443167 1987 ntBASIC20.54■□□□□ 0.88
AP1S2P56377 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S2P56377 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S2P56377 ZNRF2P3-201ENST00000424200 374 ntBASIC20.54■□□□□ 0.88
AP1S2P56377 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.54■□□□□ 0.88
AP1S2P56377 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S2P56377 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.54■□□□□ 0.88
AP1S2P56377 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S2P56377 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S2P56377 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms