Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH12P55289 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.65■□□□□ 0.74
CDH12P55289 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH12P55289 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH12P55289 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
CDH12P55289 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH12P55289 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH12P55289 OXCT2P1-201ENST00000447263 1535 ntBASIC19.65■□□□□ 0.74
CDH12P55289 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH12P55289 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CDH12P55289 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH12P55289 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CDH12P55289 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH12P55289 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH12P55289 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH12P55289 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH12P55289 AL136116.3-201ENST00000402907 1138 ntBASIC19.64■□□□□ 0.73
CDH12P55289 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH12P55289 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH12P55289 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CDH12P55289 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.64■□□□□ 0.73
CDH12P55289 LINC01521-201ENST00000504184 1943 ntBASIC19.64■□□□□ 0.73
CDH12P55289 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH12P55289 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
CDH12P55289 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH12P55289 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDH12P55289 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH12P55289 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH12P55289 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH12P55289 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH12P55289 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH12P55289 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH12P55289 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CDH12P55289 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.63■□□□□ 0.73
CDH12P55289 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH12P55289 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH12P55289 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH12P55289 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDH12P55289 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CDH12P55289 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH12P55289 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH12P55289 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH12P55289 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH12P55289 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH12P55289 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH12P55289 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH12P55289 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH12P55289 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH12P55289 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH12P55289 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.62■□□□□ 0.73
CDH12P55289 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH12P55289 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH12P55289 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH12P55289 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH12P55289 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH12P55289 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH12P55289 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH12P55289 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH12P55289 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH12P55289 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH12P55289 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDH12P55289 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH12P55289 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CDH12P55289 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH12P55289 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH12P55289 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH12P55289 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH12P55289 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.61■□□□□ 0.73
CDH12P55289 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH12P55289 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH12P55289 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH12P55289 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CDH12P55289 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH12P55289 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH12P55289 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH12P55289 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH12P55289 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH12P55289 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH12P55289 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH12P55289 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDH12P55289 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH12P55289 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH12P55289 AP005435.1-201ENST00000529293 1178 ntBASIC19.6■□□□□ 0.73
CDH12P55289 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH12P55289 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CDH12P55289 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CDH12P55289 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.6■□□□□ 0.73
CDH12P55289 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CDH12P55289 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH12P55289 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CDH12P55289 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
CDH12P55289 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.6■□□□□ 0.73
CDH12P55289 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.6■□□□□ 0.73
CDH12P55289 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH12P55289 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH12P55289 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH12P55289 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.59■□□□□ 0.73
CDH12P55289 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH12P55289 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDH12P55289 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms