Protein–RNA interactions for Protein: P53882

TDA7, Topoisomerase I damage affected protein 7, yeastyeast

Predicted RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA7P53882 YLR456WYLR456W 615 nt3.31□□□□□ -1.88
TDA7P53882 YML053CYML053C 639 nt3.31□□□□□ -1.88
TDA7P53882 RPA43YOR340C 981 nt3.31□□□□□ -1.88
TDA7P53882 YPL077CYPL077C 723 nt3.31□□□□□ -1.88
TDA7P53882 VAS1YGR094W 3315 nt3.31□□□□□ -1.88
TDA7P53882 ECM16YMR128W 3804 nt3.3□□□□□ -1.88
TDA7P53882 SEC27YGL137W 2670 nt3.3□□□□□ -1.88
TDA7P53882 ERG9YHR190W 1335 nt3.3□□□□□ -1.88
TDA7P53882 DTD1YDL219W 453 nt3.3□□□□□ -1.88
TDA7P53882 RPS18AYDR450W 441 nt3.3□□□□□ -1.88
TDA7P53882 LOC1YFR001W 615 nt3.3□□□□□ -1.88
TDA7P53882 ERJ5YFR041C 888 nt3.3□□□□□ -1.88
TDA7P53882 YGR018CYGR018C 330 nt3.3□□□□□ -1.88
TDA7P53882 YJL133C-AYJL133C-A 225 nt3.3□□□□□ -1.88
TDA7P53882 SDS22YKL193C 1017 nt3.3□□□□□ -1.88
TDA7P53882 YPT7YML001W 627 nt3.3□□□□□ -1.88
TDA7P53882 YMR087WYMR087W 855 nt3.3□□□□□ -1.88
TDA7P53882 IZH2YOL002C 954 nt3.3□□□□□ -1.88
TDA7P53882 MIX23YBL107C 591 nt3.3□□□□□ -1.88
TDA7P53882 TIR2YOR010C 756 nt3.3□□□□□ -1.88
TDA7P53882 NOC2YOR206W 2133 nt3.3□□□□□ -1.88
TDA7P53882 YOR387CYOR387C 621 nt3.3□□□□□ -1.88
TDA7P53882 DIP2YLR129W 2832 nt3.3□□□□□ -1.88
TDA7P53882 YPR022CYPR022C 3402 nt3.3□□□□□ -1.88
TDA7P53882 YTA7YGR270W 4140 nt3.3□□□□□ -1.88
TDA7P53882 MLH2YLR035C 2088 nt3.29□□□□□ -1.88
TDA7P53882 STE24YJR117W 1362 nt3.29□□□□□ -1.88
TDA7P53882 YDR170W-AYDR170W-A 1323 nt3.29□□□□□ -1.88
TDA7P53882 YMR046CYMR046C 1323 nt3.29□□□□□ -1.88
TDA7P53882 YDR340WYDR340W 303 nt3.29□□□□□ -1.88
TDA7P53882 ATP6Q0085 780 nt3.29□□□□□ -1.88
TDA7P53882 MRPL49YJL096W 486 nt3.29□□□□□ -1.88
TDA7P53882 MBB1YJL199C 327 nt3.29□□□□□ -1.88
TDA7P53882 SFT1YKL006C-A 294 nt3.29□□□□□ -1.88
TDA7P53882 YKL065W-AYKL065W-A 222 nt3.29□□□□□ -1.88
TDA7P53882 IRC21YMR073C 606 nt3.29□□□□□ -1.88
TDA7P53882 RIM11YMR139W 1113 nt3.29□□□□□ -1.88
TDA7P53882 YMR187CYMR187C 1296 nt3.29□□□□□ -1.88
TDA7P53882 GIM3YNL153C 390 nt3.29□□□□□ -1.88
TDA7P53882 ATP11YNL315C 957 nt3.29□□□□□ -1.88
TDA7P53882 MPP6YNR024W 561 nt3.29□□□□□ -1.88
TDA7P53882 snR24snR24 89 nt3.29□□□□□ -1.88
TDA7P53882 SRP1YNL189W 1629 nt3.29□□□□□ -1.88
TDA7P53882 PKP2YGL059W 1476 nt3.28□□□□□ -1.88
TDA7P53882 YJL049WYJL049W 1353 nt3.28□□□□□ -1.88
TDA7P53882 FLO5YHR211W 3228 nt3.28□□□□□ -1.88
TDA7P53882 YDR210W-AYDR210W-A 1317 nt3.28□□□□□ -1.88
TDA7P53882 FAD1YDL045C 921 nt3.28□□□□□ -1.88
TDA7P53882 YPD1YDL235C 504 nt3.28□□□□□ -1.88
TDA7P53882 tF(GAA)DtF(GAA)D 73 nt3.28□□□□□ -1.88
TDA7P53882 tF(GAA)NtF(GAA)N 73 nt3.28□□□□□ -1.88
TDA7P53882 SEC4YFL005W 648 nt3.28□□□□□ -1.88
TDA7P53882 CDC26YFR036W 375 nt3.28□□□□□ -1.88
TDA7P53882 VAR1Q0140 1197 nt3.28□□□□□ -1.88
TDA7P53882 NNF1YJR112W 606 nt3.28□□□□□ -1.88
TDA7P53882 APC9YLR102C 798 nt3.28□□□□□ -1.88
TDA7P53882 SWC7YLR385C 399 nt3.28□□□□□ -1.88
TDA7P53882 YMR181CYMR181C 465 nt3.28□□□□□ -1.88
TDA7P53882 YMR316C-AYMR316C-A 312 nt3.28□□□□□ -1.88
TDA7P53882 YOL029CYOL029C 606 nt3.28□□□□□ -1.88
TDA7P53882 DIB1YPR082C 432 nt3.28□□□□□ -1.88
TDA7P53882 TAF8YML114C 1533 nt3.28□□□□□ -1.88
TDA7P53882 YOR022CYOR022C 2148 nt3.28□□□□□ -1.89
TDA7P53882 ISW2YOR304W 3363 nt3.28□□□□□ -1.89
TDA7P53882 SSM4YIL030C 3960 nt3.27□□□□□ -1.89
TDA7P53882 SPT23YKL020C 3249 nt3.27□□□□□ -1.89
TDA7P53882 YOL019WYOL019W 1656 nt3.27□□□□□ -1.89
TDA7P53882 BUD5YCR038C 1929 nt3.27□□□□□ -1.89
TDA7P53882 YFL002W-BYFL002W-B 1317 nt3.27□□□□□ -1.89
TDA7P53882 YGR161W-AYGR161W-A 1317 nt3.27□□□□□ -1.89
TDA7P53882 YBL100W-AYBL100W-A 1317 nt3.27□□□□□ -1.89
TDA7P53882 YCL020WYCL020W 1317 nt3.27□□□□□ -1.89
TDA7P53882 DAP2YHR028C 2457 nt3.27□□□□□ -1.89
TDA7P53882 YOR296WYOR296W 3870 nt3.27□□□□□ -1.89
TDA7P53882 YDR250CYDR250C 276 nt3.27□□□□□ -1.89
TDA7P53882 ECM11YDR446W 909 nt3.27□□□□□ -1.89
TDA7P53882 YGR109W-AYGR109W-A 873 nt3.27□□□□□ -1.89
TDA7P53882 RGI2YIL057C 495 nt3.27□□□□□ -1.89
TDA7P53882 YIL082WYIL082W 873 nt3.27□□□□□ -1.89
TDA7P53882 ATG27YJL178C 816 nt3.27□□□□□ -1.89
TDA7P53882 YBR071WYBR071W 636 nt3.27□□□□□ -1.89
TDA7P53882 YBR141W-AYBR141W-A 96 nt3.27□□□□□ -1.89
TDA7P53882 THR4YCR053W 1545 nt3.27□□□□□ -1.89
TDA7P53882 RNA14YMR061W 2034 nt3.27□□□□□ -1.89
TDA7P53882 GCD1YOR260W 1737 nt3.27□□□□□ -1.89
TDA7P53882 HUL5YGL141W 2733 nt3.27□□□□□ -1.89
TDA7P53882 VMA1YDL185W 3216 nt3.26□□□□□ -1.89
TDA7P53882 YDR381C-AYDR381C-A 345 nt3.26□□□□□ -1.89
TDA7P53882 LRS4YDR439W 1044 nt3.26□□□□□ -1.89
TDA7P53882 RPS8BYER102W 603 nt3.26□□□□□ -1.89
TDA7P53882 YGR107WYGR107W 450 nt3.26□□□□□ -1.89
TDA7P53882 BIO2YGR286C 1128 nt3.26□□□□□ -1.89
TDA7P53882 YGR293CYGR293C 462 nt3.26□□□□□ -1.89
TDA7P53882 YHL048C-AYHL048C-A 135 nt3.26□□□□□ -1.89
TDA7P53882 APQ13YJL075C 417 nt3.26□□□□□ -1.89
TDA7P53882 STE18YJR086W 333 nt3.26□□□□□ -1.89
TDA7P53882 ENT3YJR125C 1227 nt3.26□□□□□ -1.89
TDA7P53882 YKR011CYKR011C 1062 nt3.26□□□□□ -1.89
TDA7P53882 ERP1YAR002C-A 660 nt3.26□□□□□ -1.89
TDA7P53882 RLP24YLR009W 600 nt3.26□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms