Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GTF2A1P52655 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
GTF2A1P52655 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2A1P52655 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.69■□□□□ 0.9
GTF2A1P52655 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.69■□□□□ 0.9
GTF2A1P52655 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
GTF2A1P52655 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2A1P52655 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2A1P52655 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2A1P52655 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2A1P52655 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.69■□□□□ 0.9
GTF2A1P52655 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2A1P52655 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2A1P52655 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2A1P52655 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2A1P52655 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
GTF2A1P52655 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GTF2A1P52655 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.69■□□□□ 0.9
GTF2A1P52655 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.69■□□□□ 0.9
GTF2A1P52655 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.69■□□□□ 0.9
GTF2A1P52655 AC007613.1-201ENST00000572811 2597 ntBASIC20.69■□□□□ 0.9
GTF2A1P52655 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
GTF2A1P52655 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
GTF2A1P52655 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.68■□□□□ 0.9
GTF2A1P52655 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.68■□□□□ 0.9
GTF2A1P52655 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GTF2A1P52655 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GTF2A1P52655 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.68■□□□□ 0.9
GTF2A1P52655 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.68■□□□□ 0.9
GTF2A1P52655 AL032819.2-201ENST00000624543 2162 ntBASIC20.68■□□□□ 0.9
GTF2A1P52655 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GTF2A1P52655 AL157400.5-201ENST00000507624 621 ntBASIC20.68■□□□□ 0.9
GTF2A1P52655 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GTF2A1P52655 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GTF2A1P52655 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GTF2A1P52655 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GTF2A1P52655 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.68■□□□□ 0.9
GTF2A1P52655 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GTF2A1P52655 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
GTF2A1P52655 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.67■□□□□ 0.9
GTF2A1P52655 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.67■□□□□ 0.9
GTF2A1P52655 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.67■□□□□ 0.9
GTF2A1P52655 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GTF2A1P52655 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GTF2A1P52655 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GTF2A1P52655 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
GTF2A1P52655 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
GTF2A1P52655 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GTF2A1P52655 AC025884.2-201ENST00000553429 711 ntBASIC20.66■□□□□ 0.9
GTF2A1P52655 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.66■□□□□ 0.9
GTF2A1P52655 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.66■□□□□ 0.9
GTF2A1P52655 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
GTF2A1P52655 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
GTF2A1P52655 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GTF2A1P52655 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GTF2A1P52655 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.66■□□□□ 0.9
GTF2A1P52655 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
GTF2A1P52655 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GTF2A1P52655 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF2A1P52655 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF2A1P52655 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF2A1P52655 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF2A1P52655 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF2A1P52655 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.65■□□□□ 0.9
GTF2A1P52655 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
GTF2A1P52655 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF2A1P52655 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF2A1P52655 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.65■□□□□ 0.9
GTF2A1P52655 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.65■□□□□ 0.9
GTF2A1P52655 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GTF2A1P52655 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GTF2A1P52655 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
GTF2A1P52655 Z98882.1-201ENST00000622160 2253 ntBASIC20.65■□□□□ 0.9
GTF2A1P52655 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
GTF2A1P52655 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF2A1P52655 AC090340.1-201ENST00000620778 4980 ntBASIC20.65■□□□□ 0.9
GTF2A1P52655 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GTF2A1P52655 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF2A1P52655 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.64■□□□□ 0.9
GTF2A1P52655 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
GTF2A1P52655 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.9
GTF2A1P52655 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GTF2A1P52655 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.64■□□□□ 0.9
GTF2A1P52655 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
GTF2A1P52655 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GTF2A1P52655 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms