Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17■□□□□ 0.31
RAB5CP51148 BX323043.1-201ENST00000641006 1765 ntBASIC17■□□□□ 0.31
RAB5CP51148 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB5CP51148 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB5CP51148 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RAB5CP51148 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB5CP51148 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB5CP51148 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17■□□□□ 0.31
RAB5CP51148 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB5CP51148 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB5CP51148 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RAB5CP51148 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB5CP51148 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB5CP51148 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5CP51148 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
RAB5CP51148 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5CP51148 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RAB5CP51148 AFG3L1P-217ENST00000557444 2447 ntBASIC16.99■□□□□ 0.31
RAB5CP51148 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5CP51148 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5CP51148 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5CP51148 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB5CP51148 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5CP51148 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5CP51148 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5CP51148 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.99■□□□□ 0.31
RAB5CP51148 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5CP51148 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.99■□□□□ 0.31
RAB5CP51148 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5CP51148 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5CP51148 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB5CP51148 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5CP51148 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB5CP51148 LETM1P2-201ENST00000597330 2178 ntBASIC16.99■□□□□ 0.31
RAB5CP51148 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5CP51148 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.99■□□□□ 0.31
RAB5CP51148 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RAB5CP51148 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB5CP51148 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.98■□□□□ 0.31
RAB5CP51148 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB5CP51148 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RAB5CP51148 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB5CP51148 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RAB5CP51148 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.98■□□□□ 0.31
RAB5CP51148 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB5CP51148 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
RAB5CP51148 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB5CP51148 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB5CP51148 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.98■□□□□ 0.31
RAB5CP51148 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
RAB5CP51148 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RAB5CP51148 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB5CP51148 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RAB5CP51148 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB5CP51148 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RAB5CP51148 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB5CP51148 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
RAB5CP51148 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB5CP51148 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB5CP51148 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAB5CP51148 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB5CP51148 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.97■□□□□ 0.31
RAB5CP51148 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB5CP51148 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RAB5CP51148 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RAB5CP51148 AC004448.1-201ENST00000458332 883 ntBASIC16.97■□□□□ 0.31
RAB5CP51148 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RAB5CP51148 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RAB5CP51148 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.97■□□□□ 0.31
RAB5CP51148 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RAB5CP51148 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB5CP51148 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.97■□□□□ 0.31
RAB5CP51148 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB5CP51148 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAB5CP51148 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAB5CP51148 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB5CP51148 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB5CP51148 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.97■□□□□ 0.31
RAB5CP51148 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RAB5CP51148 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.97■□□□□ 0.31
RAB5CP51148 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAB5CP51148 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
RAB5CP51148 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RAB5CP51148 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RAB5CP51148 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RAB5CP51148 SMG8-203ENST00000578922 2178 ntBASIC16.96■□□□□ 0.31
RAB5CP51148 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB5CP51148 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB5CP51148 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB5CP51148 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB5CP51148 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB5CP51148 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB5CP51148 AC018755.3-202ENST00000596210 929 ntBASIC16.96■□□□□ 0.31
RAB5CP51148 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.96■□□□□ 0.31
RAB5CP51148 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.96■□□□□ 0.31
RAB5CP51148 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAB5CP51148 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAB5CP51148 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.96■□□□□ 0.31
RAB5CP51148 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
RAB5CP51148 AC073314.1-201ENST00000568729 2216 ntBASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms