Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
HNF4AP41235 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.48■□□□□ 0.87
HNF4AP41235 AL354811.1-201ENST00000610286 706 ntBASIC20.48■□□□□ 0.87
HNF4AP41235 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.48■□□□□ 0.87
HNF4AP41235 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HNF4AP41235 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HNF4AP41235 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.48■□□□□ 0.87
HNF4AP41235 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.48■□□□□ 0.87
HNF4AP41235 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.47■□□□□ 0.87
HNF4AP41235 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
HNF4AP41235 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HNF4AP41235 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.47■□□□□ 0.87
HNF4AP41235 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HNF4AP41235 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.47■□□□□ 0.87
HNF4AP41235 AL358852.1-201ENST00000623174 1268 ntBASIC20.47■□□□□ 0.87
HNF4AP41235 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
HNF4AP41235 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
HNF4AP41235 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HNF4AP41235 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HNF4AP41235 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HNF4AP41235 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HNF4AP41235 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HNF4AP41235 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.46■□□□□ 0.87
HNF4AP41235 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HNF4AP41235 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HNF4AP41235 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.46■□□□□ 0.87
HNF4AP41235 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
HNF4AP41235 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HNF4AP41235 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.46■□□□□ 0.87
HNF4AP41235 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HNF4AP41235 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.46■□□□□ 0.87
HNF4AP41235 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
HNF4AP41235 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HNF4AP41235 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.46■□□□□ 0.87
HNF4AP41235 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HNF4AP41235 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
HNF4AP41235 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HNF4AP41235 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HNF4AP41235 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.45■□□□□ 0.86
HNF4AP41235 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HNF4AP41235 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HNF4AP41235 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HNF4AP41235 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HNF4AP41235 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.45■□□□□ 0.86
HNF4AP41235 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HNF4AP41235 AC055733.4-201ENST00000638462 1354 ntBASIC20.45■□□□□ 0.86
HNF4AP41235 AC005224.4-201ENST00000583262 1652 ntBASIC20.45■□□□□ 0.86
HNF4AP41235 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNF4AP41235 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
HNF4AP41235 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HNF4AP41235 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNF4AP41235 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNF4AP41235 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HNF4AP41235 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.44■□□□□ 0.86
HNF4AP41235 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HNF4AP41235 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HNF4AP41235 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNF4AP41235 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNF4AP41235 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HNF4AP41235 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNF4AP41235 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNF4AP41235 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.43■□□□□ 0.86
HNF4AP41235 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HNF4AP41235 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HNF4AP41235 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.43■□□□□ 0.86
HNF4AP41235 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.43■□□□□ 0.86
HNF4AP41235 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HNF4AP41235 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNF4AP41235 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.43■□□□□ 0.86
HNF4AP41235 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.43■□□□□ 0.86
HNF4AP41235 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HNF4AP41235 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HNF4AP41235 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.43■□□□□ 0.86
HNF4AP41235 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.43■□□□□ 0.86
HNF4AP41235 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.43■□□□□ 0.86
HNF4AP41235 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNF4AP41235 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNF4AP41235 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNF4AP41235 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNF4AP41235 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.43■□□□□ 0.86
HNF4AP41235 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNF4AP41235 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HNF4AP41235 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HNF4AP41235 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HNF4AP41235 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HNF4AP41235 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HNF4AP41235 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HNF4AP41235 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HNF4AP41235 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HNF4AP41235 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.42■□□□□ 0.86
HNF4AP41235 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HNF4AP41235 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HNF4AP41235 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HNF4AP41235 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HNF4AP41235 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
HNF4AP41235 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HNF4AP41235 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.41■□□□□ 0.86
HNF4AP41235 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HNF4AP41235 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HNF4AP41235 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms