Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.1■□□□□ 0.81
RORAP35398 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RORAP35398 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.1■□□□□ 0.81
RORAP35398 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.1■□□□□ 0.81
RORAP35398 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RORAP35398 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.1■□□□□ 0.81
RORAP35398 AL109923.1-201ENST00000618799 583 ntBASIC20.1■□□□□ 0.81
RORAP35398 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.1■□□□□ 0.81
RORAP35398 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RORAP35398 AC080038.3-201ENST00000623346 1952 ntBASIC20.1■□□□□ 0.81
RORAP35398 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RORAP35398 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RORAP35398 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RORAP35398 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RORAP35398 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.09■□□□□ 0.81
RORAP35398 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RORAP35398 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RORAP35398 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RORAP35398 AC242852.2-201ENST00000615738 1807 ntBASIC20.09■□□□□ 0.81
RORAP35398 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RORAP35398 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RORAP35398 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RORAP35398 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.09■□□□□ 0.81
RORAP35398 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.09■□□□□ 0.81
RORAP35398 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RORAP35398 AC007322.1-201ENST00000426983 750 ntBASIC20.09■□□□□ 0.81
RORAP35398 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.09■□□□□ 0.81
RORAP35398 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.09■□□□□ 0.81
RORAP35398 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.09■□□□□ 0.81
RORAP35398 SLC7A5P1-201ENST00000568957 537 ntBASIC20.09■□□□□ 0.81
RORAP35398 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.09■□□□□ 0.81
RORAP35398 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RORAP35398 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
RORAP35398 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.09■□□□□ 0.81
RORAP35398 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.09■□□□□ 0.81
RORAP35398 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RORAP35398 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RORAP35398 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RORAP35398 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RORAP35398 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RORAP35398 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RORAP35398 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RORAP35398 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.08■□□□□ 0.81
RORAP35398 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RORAP35398 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.08■□□□□ 0.81
RORAP35398 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RORAP35398 GPX1P1-201ENST00000388829 606 ntBASIC20.08■□□□□ 0.81
RORAP35398 CNN2P6-201ENST00000439038 900 ntBASIC20.08■□□□□ 0.81
RORAP35398 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.08■□□□□ 0.81
RORAP35398 AC010536.3-201ENST00000620306 533 ntBASIC20.08■□□□□ 0.81
RORAP35398 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RORAP35398 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RORAP35398 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RORAP35398 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RORAP35398 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
RORAP35398 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.07■□□□□ 0.8
RORAP35398 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RORAP35398 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.07■□□□□ 0.8
RORAP35398 AC005181.1-201ENST00000604782 1256 ntBASIC20.07■□□□□ 0.8
RORAP35398 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.07■□□□□ 0.8
RORAP35398 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RORAP35398 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
RORAP35398 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RORAP35398 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.07■□□□□ 0.8
RORAP35398 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RORAP35398 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RORAP35398 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RORAP35398 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RORAP35398 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RORAP35398 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RORAP35398 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
RORAP35398 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.06■□□□□ 0.8
RORAP35398 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.06■□□□□ 0.8
RORAP35398 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.06■□□□□ 0.8
RORAP35398 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
RORAP35398 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RORAP35398 AC092053.2-201ENST00000640557 1818 ntBASIC20.06■□□□□ 0.8
RORAP35398 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RORAP35398 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.06■□□□□ 0.8
RORAP35398 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RORAP35398 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RORAP35398 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.05■□□□□ 0.8
RORAP35398 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
RORAP35398 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RORAP35398 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RORAP35398 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.05■□□□□ 0.8
RORAP35398 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.05■□□□□ 0.8
RORAP35398 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.05■□□□□ 0.8
RORAP35398 SLC7A5P2-201ENST00000553010 536 ntBASIC20.05■□□□□ 0.8
RORAP35398 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RORAP35398 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RORAP35398 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RORAP35398 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RORAP35398 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RORAP35398 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RORAP35398 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RORAP35398 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RORAP35398 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RORAP35398 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.04■□□□□ 0.8
RORAP35398 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms