Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.83■■□□□ 1.89
RFC4P35249 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.83■■□□□ 1.89
RFC4P35249 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RFC4P35249 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
RFC4P35249 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RFC4P35249 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.82■■□□□ 1.88
RFC4P35249 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
RFC4P35249 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC26.82■■□□□ 1.88
RFC4P35249 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
RFC4P35249 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RFC4P35249 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RFC4P35249 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RFC4P35249 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RFC4P35249 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.81■■□□□ 1.88
RFC4P35249 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.81■■□□□ 1.88
RFC4P35249 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC26.81■■□□□ 1.88
RFC4P35249 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.81■■□□□ 1.88
RFC4P35249 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
RFC4P35249 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RFC4P35249 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RFC4P35249 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.8■■□□□ 1.88
RFC4P35249 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RFC4P35249 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RFC4P35249 UBE2SP1-201ENST00000450587 669 ntBASIC26.8■■□□□ 1.88
RFC4P35249 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.8■■□□□ 1.88
RFC4P35249 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
RFC4P35249 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RFC4P35249 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.8■■□□□ 1.88
RFC4P35249 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.8■■□□□ 1.88
RFC4P35249 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
RFC4P35249 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RFC4P35249 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RFC4P35249 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RFC4P35249 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RFC4P35249 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.8■■□□□ 1.88
RFC4P35249 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RFC4P35249 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
RFC4P35249 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.79■■□□□ 1.88
RFC4P35249 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RFC4P35249 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
RFC4P35249 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
RFC4P35249 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.79■■□□□ 1.88
RFC4P35249 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC26.79■■□□□ 1.88
RFC4P35249 AC061975.6-201ENST00000579045 1553 ntBASIC26.79■■□□□ 1.88
RFC4P35249 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.79■■□□□ 1.88
RFC4P35249 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RFC4P35249 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.78■■□□□ 1.88
RFC4P35249 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RFC4P35249 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.78■■□□□ 1.88
RFC4P35249 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.78■■□□□ 1.88
RFC4P35249 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.78■■□□□ 1.88
RFC4P35249 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.78■■□□□ 1.88
RFC4P35249 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.78■■□□□ 1.88
RFC4P35249 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RFC4P35249 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RFC4P35249 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.77■■□□□ 1.88
RFC4P35249 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RFC4P35249 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
RFC4P35249 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.77■■□□□ 1.88
RFC4P35249 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RFC4P35249 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RFC4P35249 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.77■■□□□ 1.88
RFC4P35249 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
RFC4P35249 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RFC4P35249 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.77■■□□□ 1.88
RFC4P35249 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.77■■□□□ 1.88
RFC4P35249 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.77■■□□□ 1.88
RFC4P35249 AL359736.2-201ENST00000621992 437 ntBASIC26.77■■□□□ 1.88
RFC4P35249 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.77■■□□□ 1.88
RFC4P35249 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.77■■□□□ 1.88
RFC4P35249 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.77■■□□□ 1.88
RFC4P35249 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.88
RFC4P35249 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.87
RFC4P35249 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RFC4P35249 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
RFC4P35249 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.76■■□□□ 1.87
RFC4P35249 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
RFC4P35249 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.76■■□□□ 1.87
RFC4P35249 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.76■■□□□ 1.87
RFC4P35249 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC26.76■■□□□ 1.87
RFC4P35249 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
RFC4P35249 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
RFC4P35249 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
RFC4P35249 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.76■■□□□ 1.87
RFC4P35249 KRT17P1-201ENST00000399211 1546 ntBASIC26.75■■□□□ 1.87
RFC4P35249 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.75■■□□□ 1.87
RFC4P35249 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
RFC4P35249 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
RFC4P35249 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RFC4P35249 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.75■■□□□ 1.87
RFC4P35249 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
RFC4P35249 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.75■■□□□ 1.87
RFC4P35249 AL355472.2-201ENST00000422958 438 ntBASIC26.75■■□□□ 1.87
RFC4P35249 AC008403.3-201ENST00000598924 454 ntBASIC26.75■■□□□ 1.87
RFC4P35249 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
RFC4P35249 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RFC4P35249 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
RFC4P35249 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.74■■□□□ 1.87
RFC4P35249 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RFC4P35249 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms