Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP24386 AC012414.1-201ENST00000556676 535 ntBASIC19.71■□□□□ 0.75
CHMP24386 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.71■□□□□ 0.75
CHMP24386 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP24386 FEM1AP4-201ENST00000443167 1987 ntBASIC19.71■□□□□ 0.75
CHMP24386 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CHMP24386 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP24386 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CHMP24386 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP24386 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP24386 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP24386 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP24386 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP24386 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP24386 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP24386 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.7■□□□□ 0.74
CHMP24386 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.7■□□□□ 0.74
CHMP24386 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.7■□□□□ 0.74
CHMP24386 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP24386 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP24386 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP24386 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP24386 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CHMP24386 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP24386 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP24386 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP24386 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP24386 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.69■□□□□ 0.74
CHMP24386 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.69■□□□□ 0.74
CHMP24386 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CHMP24386 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.69■□□□□ 0.74
CHMP24386 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMP24386 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMP24386 AC105233.4-201ENST00000642045 216 ntBASIC19.69■□□□□ 0.74
CHMP24386 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMP24386 OXCT2P1-201ENST00000447263 1535 ntBASIC19.69■□□□□ 0.74
CHMP24386 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP24386 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMP24386 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP24386 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMP24386 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP24386 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP24386 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP24386 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP24386 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP24386 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP24386 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMP24386 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.68■□□□□ 0.74
CHMP24386 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMP24386 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP24386 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CHMP24386 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMP24386 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP24386 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMP24386 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP24386 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP24386 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP24386 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP24386 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP24386 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.67■□□□□ 0.74
CHMP24386 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.67■□□□□ 0.74
CHMP24386 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP24386 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CHMP24386 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.67■□□□□ 0.74
CHMP24386 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP24386 AC027612.3-201ENST00000413684 1047 ntBASIC19.67■□□□□ 0.74
CHMP24386 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP24386 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.67■□□□□ 0.74
CHMP24386 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP24386 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP24386 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP24386 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP24386 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
CHMP24386 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP24386 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP24386 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP24386 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.66■□□□□ 0.74
CHMP24386 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CHMP24386 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP24386 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP24386 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP24386 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP24386 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP24386 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.66■□□□□ 0.74
CHMP24386 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP24386 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms