Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 KRT19P1-201ENST00000405746 1186 ntBASIC20.62■□□□□ 0.89
CDH3P22223 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.62■□□□□ 0.89
CDH3P22223 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH3P22223 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH3P22223 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.62■□□□□ 0.89
CDH3P22223 KRT18P61-201ENST00000585825 1298 ntBASIC20.62■□□□□ 0.89
CDH3P22223 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH3P22223 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH3P22223 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH3P22223 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDH3P22223 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH3P22223 KRT87P-202ENST00000534226 1464 ntBASIC20.62■□□□□ 0.89
CDH3P22223 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH3P22223 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH3P22223 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH3P22223 AC055733.4-201ENST00000638462 1354 ntBASIC20.61■□□□□ 0.89
CDH3P22223 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH3P22223 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
CDH3P22223 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH3P22223 AC016769.1-201ENST00000409132 1010 ntBASIC20.61■□□□□ 0.89
CDH3P22223 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.61■□□□□ 0.89
CDH3P22223 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH3P22223 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH3P22223 AC137761.2-201ENST00000561729 223 ntBASIC20.61■□□□□ 0.89
CDH3P22223 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.61■□□□□ 0.89
CDH3P22223 AC145350.3-201ENST00000569033 163 ntBASIC20.61■□□□□ 0.89
CDH3P22223 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH3P22223 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CDH3P22223 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH3P22223 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH3P22223 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH3P22223 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH3P22223 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH3P22223 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH3P22223 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH3P22223 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CDH3P22223 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH3P22223 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH3P22223 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.6■□□□□ 0.89
CDH3P22223 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH3P22223 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH3P22223 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH3P22223 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH3P22223 AC092437.1-201ENST00000624794 1048 ntBASIC20.6■□□□□ 0.89
CDH3P22223 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH3P22223 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH3P22223 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH3P22223 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CDH3P22223 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH3P22223 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH3P22223 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH3P22223 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
CDH3P22223 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH3P22223 AC092667.1-201ENST00000434301 2586 ntBASIC20.59■□□□□ 0.89
CDH3P22223 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH3P22223 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.59■□□□□ 0.89
CDH3P22223 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDH3P22223 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.59■□□□□ 0.89
CDH3P22223 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH3P22223 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH3P22223 AC004911.1-201ENST00000416316 871 ntBASIC20.59■□□□□ 0.89
CDH3P22223 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH3P22223 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.59■□□□□ 0.89
CDH3P22223 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CDH3P22223 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH3P22223 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH3P22223 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH3P22223 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CDH3P22223 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.58■□□□□ 0.89
CDH3P22223 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH3P22223 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH3P22223 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDH3P22223 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDH3P22223 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH3P22223 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDH3P22223 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDH3P22223 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDH3P22223 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDH3P22223 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDH3P22223 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.58■□□□□ 0.89
CDH3P22223 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.58■□□□□ 0.89
CDH3P22223 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.58■□□□□ 0.89
CDH3P22223 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH3P22223 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.58■□□□□ 0.88
CDH3P22223 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDH3P22223 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.58■□□□□ 0.88
CDH3P22223 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH3P22223 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH3P22223 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDH3P22223 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH3P22223 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH3P22223 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH3P22223 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.58■□□□□ 0.88
CDH3P22223 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH3P22223 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH3P22223 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.57■□□□□ 0.88
CDH3P22223 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.57■□□□□ 0.88
CDH3P22223 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.57■□□□□ 0.88
CDH3P22223 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CDH3P22223 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms