Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC003102.1-202ENST00000563394 1796 ntBASIC20.07■□□□□ 0.8
CCL4P13236 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCL4P13236 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.07■□□□□ 0.8
CCL4P13236 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCL4P13236 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCL4P13236 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.06■□□□□ 0.8
CCL4P13236 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCL4P13236 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCL4P13236 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCL4P13236 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.06■□□□□ 0.8
CCL4P13236 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCL4P13236 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CCL4P13236 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCL4P13236 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCL4P13236 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.06■□□□□ 0.8
CCL4P13236 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.06■□□□□ 0.8
CCL4P13236 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCL4P13236 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.05■□□□□ 0.8
CCL4P13236 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCL4P13236 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCL4P13236 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCL4P13236 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.05■□□□□ 0.8
CCL4P13236 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCL4P13236 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.05■□□□□ 0.8
CCL4P13236 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCL4P13236 AC083880.1-201ENST00000608266 535 ntBASIC20.05■□□□□ 0.8
CCL4P13236 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCL4P13236 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCL4P13236 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.05■□□□□ 0.8
CCL4P13236 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCL4P13236 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL4P13236 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL4P13236 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.04■□□□□ 0.8
CCL4P13236 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL4P13236 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL4P13236 AC010980.2-201ENST00000587099 1412 ntBASIC20.04■□□□□ 0.8
CCL4P13236 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL4P13236 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.04■□□□□ 0.8
CCL4P13236 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL4P13236 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL4P13236 KRT18P29-201ENST00000397031 1267 ntBASIC20.04■□□□□ 0.8
CCL4P13236 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.04■□□□□ 0.8
CCL4P13236 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CCL4P13236 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CCL4P13236 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL4P13236 ITM2C-210ENST00000620962 501 ntBASIC20.04■□□□□ 0.8
CCL4P13236 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.04■□□□□ 0.8
CCL4P13236 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL4P13236 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.04■□□□□ 0.8
CCL4P13236 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCL4P13236 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCL4P13236 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL4P13236 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCL4P13236 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL4P13236 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCL4P13236 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL4P13236 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCL4P13236 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL4P13236 RARRES2P4-201ENST00000514074 484 ntBASIC20.03■□□□□ 0.8
CCL4P13236 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.03■□□□□ 0.8
CCL4P13236 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.03■□□□□ 0.8
CCL4P13236 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.03■□□□□ 0.8
CCL4P13236 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.03■□□□□ 0.8
CCL4P13236 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.03■□□□□ 0.8
CCL4P13236 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL4P13236 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.03■□□□□ 0.8
CCL4P13236 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.03■□□□□ 0.8
CCL4P13236 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCL4P13236 MYC-209ENST00000641252 345 ntBASIC20.03■□□□□ 0.8
CCL4P13236 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL4P13236 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CCL4P13236 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL4P13236 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCL4P13236 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCL4P13236 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCL4P13236 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCL4P13236 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCL4P13236 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.02■□□□□ 0.8
CCL4P13236 AC097658.1-201ENST00000475555 843 ntBASIC20.02■□□□□ 0.8
CCL4P13236 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.02■□□□□ 0.8
CCL4P13236 AL162412.1-201ENST00000567129 965 ntBASIC20.02■□□□□ 0.8
CCL4P13236 AC243732.1-201ENST00000612648 864 ntBASIC20.02■□□□□ 0.8
CCL4P13236 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCL4P13236 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.02■□□□□ 0.8
CCL4P13236 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
CCL4P13236 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCL4P13236 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CCL4P13236 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.02■□□□□ 0.8
CCL4P13236 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CCL4P13236 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CCL4P13236 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
CCL4P13236 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCL4P13236 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCL4P13236 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.01■□□□□ 0.79
CCL4P13236 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.01■□□□□ 0.79
CCL4P13236 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCL4P13236 PRORSD1P-201ENST00000295112 541 ntBASIC20.01■□□□□ 0.79
CCL4P13236 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCL4P13236 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCL4P13236 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms