Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 ARP7YPR034W 1434 nt2.24□□□□□ -2.05
RPL40AP0CH08 YNL144CYNL144C 2223 nt2.23□□□□□ -2.05
RPL40AP0CH08 MYO4YAL029C 4416 nt2.23□□□□□ -2.05
RPL40AP0CH08 TCM62YBR044C 1719 nt2.23□□□□□ -2.05
RPL40AP0CH08 BRP1YGL007W 378 nt2.23□□□□□ -2.05
RPL40AP0CH08 SPO74YGL170C 1242 nt2.23□□□□□ -2.05
RPL40AP0CH08 EMP24YGL200C 612 nt2.23□□□□□ -2.05
RPL40AP0CH08 YHR137C-AYHR137C-A 651 nt2.23□□□□□ -2.05
RPL40AP0CH08 MST28YAR033W 705 nt2.23□□□□□ -2.05
RPL40AP0CH08 SNO1YMR095C 675 nt2.23□□□□□ -2.05
RPL40AP0CH08 JID1YPR061C 906 nt2.23□□□□□ -2.05
RPL40AP0CH08 GIN4YDR507C 3429 nt2.23□□□□□ -2.05
RPL40AP0CH08 SPB4YFL002C 1821 nt2.23□□□□□ -2.05
RPL40AP0CH08 ATP25YMR098C 1839 nt2.23□□□□□ -2.05
RPL40AP0CH08 GIP3YPL137C 3831 nt2.23□□□□□ -2.05
RPL40AP0CH08 YEL043WYEL043W 2871 nt2.23□□□□□ -2.05
RPL40AP0CH08 MDV1YJL112W 2145 nt2.23□□□□□ -2.05
RPL40AP0CH08 ARG2YJL071W 1725 nt2.22□□□□□ -2.05
RPL40AP0CH08 SAE2YGL175C 1038 nt2.22□□□□□ -2.05
RPL40AP0CH08 YGR015CYGR015C 987 nt2.22□□□□□ -2.05
RPL40AP0CH08 YIL047C-AYIL047C-A 369 nt2.22□□□□□ -2.05
RPL40AP0CH08 YLR365WYLR365W 333 nt2.22□□□□□ -2.05
RPL40AP0CH08 YNR062CYNR062C 984 nt2.22□□□□□ -2.05
RPL40AP0CH08 DUF1YOL087C 3351 nt2.21□□□□□ -2.06
RPL40AP0CH08 SPB1YCL054W 2526 nt2.21□□□□□ -2.06
RPL40AP0CH08 ERV1YGR029W 570 nt2.21□□□□□ -2.06
RPL40AP0CH08 SDP1YIL113W 630 nt2.21□□□□□ -2.06
RPL40AP0CH08 SAS2YMR127C 1017 nt2.21□□□□□ -2.06
RPL40AP0CH08 PAI3YMR174C 207 nt2.21□□□□□ -2.06
RPL40AP0CH08 PHO5YBR093C 1404 nt2.21□□□□□ -2.06
RPL40AP0CH08 ARA1YBR149W 1035 nt2.21□□□□□ -2.06
RPL40AP0CH08 STH1YIL126W 4080 nt2.21□□□□□ -2.06
RPL40AP0CH08 DNL4YOR005C 2835 nt2.21□□□□□ -2.06
RPL40AP0CH08 MMS1YPR164W 4224 nt2.21□□□□□ -2.06
RPL40AP0CH08 NDC80YIL144W 2076 nt2.21□□□□□ -2.06
RPL40AP0CH08 PDC2YDR081C 2778 nt2.21□□□□□ -2.06
RPL40AP0CH08 YDR249CYDR249C 1122 nt2.2□□□□□ -2.06
RPL40AP0CH08 WBP1YEL002C 1293 nt2.2□□□□□ -2.06
RPL40AP0CH08 YFL015CYFL015C 495 nt2.2□□□□□ -2.06
RPL40AP0CH08 YIL156W-BYIL156W-B 222 nt2.2□□□□□ -2.06
RPL40AP0CH08 SPC42YKL042W 1092 nt2.2□□□□□ -2.06
RPL40AP0CH08 AFT2YPL202C 1251 nt2.2□□□□□ -2.06
RPL40AP0CH08 CNA1YLR433C 1662 nt2.2□□□□□ -2.06
RPL40AP0CH08 VHR2YER064C 1518 nt2.2□□□□□ -2.06
RPL40AP0CH08 IRC20YLR247C 4671 nt2.2□□□□□ -2.06
RPL40AP0CH08 PUF6YDR496C 1971 nt2.19□□□□□ -2.06
RPL40AP0CH08 NFT1YKR103W 3657 nt2.19□□□□□ -2.06
RPL40AP0CH08 UBP8YMR223W 1416 nt2.19□□□□□ -2.06
RPL40AP0CH08 DAD4YDR320C-A 219 nt2.19□□□□□ -2.06
RPL40AP0CH08 STE2YFL026W 1296 nt2.19□□□□□ -2.06
RPL40AP0CH08 SLX9YGR081C 633 nt2.19□□□□□ -2.06
RPL40AP0CH08 YJL147CYJL147C 1149 nt2.19□□□□□ -2.06
RPL40AP0CH08 YLL044WYLL044W 447 nt2.19□□□□□ -2.06
RPL40AP0CH08 YLR154W-EYLR154W-E 204 nt2.19□□□□□ -2.06
RPL40AP0CH08 SEC65YML105C 822 nt2.19□□□□□ -2.06
RPL40AP0CH08 YDR132CYDR132C 1488 nt2.19□□□□□ -2.06
RPL40AP0CH08 SRP68YPL243W 1800 nt2.19□□□□□ -2.06
RPL40AP0CH08 NIC96YFR002W 2520 nt2.19□□□□□ -2.06
RPL40AP0CH08 MSH4YFL003C 2637 nt2.19□□□□□ -2.06
RPL40AP0CH08 CDC24YAL041W 2565 nt2.18□□□□□ -2.06
RPL40AP0CH08 COS7YDL248W 1152 nt2.18□□□□□ -2.06
RPL40AP0CH08 HYP2YEL034W 474 nt2.18□□□□□ -2.06
RPL40AP0CH08 YGL262WYGL262W 528 nt2.18□□□□□ -2.06
RPL40AP0CH08 CLC1YGR167W 702 nt2.18□□□□□ -2.06
RPL40AP0CH08 COS5YJR161C 1152 nt2.18□□□□□ -2.06
RPL40AP0CH08 MRPL38YKL170W 417 nt2.18□□□□□ -2.06
RPL40AP0CH08 YOR333CYOR333C 417 nt2.18□□□□□ -2.06
RPL40AP0CH08 DCP2YNL118C 2913 nt2.18□□□□□ -2.06
RPL40AP0CH08 SVL3YPL032C 2478 nt2.18□□□□□ -2.06
RPL40AP0CH08 CTF4YPR135W 2784 nt2.18□□□□□ -2.06
RPL40AP0CH08 RTT107YHR154W 3213 nt2.17□□□□□ -2.06
RPL40AP0CH08 SWC4YGR002C 1431 nt2.17□□□□□ -2.06
RPL40AP0CH08 YVC1YOR087W 2028 nt2.17□□□□□ -2.06
RPL40AP0CH08 PCL6YER059W 1263 nt2.17□□□□□ -2.06
RPL40AP0CH08 MRPL25YGR076C 474 nt2.17□□□□□ -2.06
RPL40AP0CH08 SWD2YKL018W 990 nt2.17□□□□□ -2.06
RPL40AP0CH08 YKR047WYKR047W 306 nt2.17□□□□□ -2.06
RPL40AP0CH08 SRL3YKR091W 741 nt2.17□□□□□ -2.06
RPL40AP0CH08 RPS22BYLR367W 393 nt2.17□□□□□ -2.06
RPL40AP0CH08 NDJ1YOL104C 1059 nt2.17□□□□□ -2.06
RPL40AP0CH08 RPS11BYBR048W 471 nt2.17□□□□□ -2.06
RPL40AP0CH08 YBR089WYBR089W 600 nt2.17□□□□□ -2.06
RPL40AP0CH08 MGA1YGR249W 1371 nt2.17□□□□□ -2.06
RPL40AP0CH08 VPS13YLL040C 9435 nt2.17□□□□□ -2.06
RPL40AP0CH08 CST9YLR394W 1449 nt2.17□□□□□ -2.06
RPL40AP0CH08 YDR034C-DYDR034C-D 5313 nt2.16□□□□□ -2.06
RPL40AP0CH08 YDR210W-BYDR210W-B 5313 nt2.16□□□□□ -2.06
RPL40AP0CH08 YLR410W-BYLR410W-B 5313 nt2.16□□□□□ -2.06
RPL40AP0CH08 YEF3YLR249W 3135 nt2.16□□□□□ -2.06
RPL40AP0CH08 ERV29YGR284C 933 nt2.16□□□□□ -2.06
RPL40AP0CH08 SYM1YLR251W 594 nt2.16□□□□□ -2.06
RPL40AP0CH08 TAF14YPL129W 735 nt2.16□□□□□ -2.06
RPL40AP0CH08 YBR209WYBR209W 318 nt2.16□□□□□ -2.06
RPL40AP0CH08 MSB1YOR188W 3414 nt2.16□□□□□ -2.06
RPL40AP0CH08 MSM1YGR171C 1728 nt2.16□□□□□ -2.06
RPL40AP0CH08 DUN1YDL101C 1542 nt2.16□□□□□ -2.06
RPL40AP0CH08 SAP190YKR028W 3102 nt2.15□□□□□ -2.06
RPL40AP0CH08 snR83snR83 306 nt2.15□□□□□ -2.07
RPL40AP0CH08 BUR2YLR226W 1188 nt2.15□□□□□ -2.07
RPL40AP0CH08 UBC12YLR306W 567 nt2.15□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms