Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
MRPL3P09001 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MRPL3P09001 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MRPL3P09001 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MRPL3P09001 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.93■□□□□ 0.62
MRPL3P09001 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.93■□□□□ 0.62
MRPL3P09001 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
MRPL3P09001 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
MRPL3P09001 AP004607.7-201ENST00000527152 1677 ntBASIC18.92■□□□□ 0.62
MRPL3P09001 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MRPL3P09001 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.92■□□□□ 0.62
MRPL3P09001 AC003102.1-202ENST00000563394 1796 ntBASIC18.92■□□□□ 0.62
MRPL3P09001 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.92■□□□□ 0.62
MRPL3P09001 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.92■□□□□ 0.62
MRPL3P09001 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.92■□□□□ 0.62
MRPL3P09001 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.92■□□□□ 0.62
MRPL3P09001 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.92■□□□□ 0.62
MRPL3P09001 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MRPL3P09001 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MRPL3P09001 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MRPL3P09001 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
MRPL3P09001 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MRPL3P09001 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MRPL3P09001 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
MRPL3P09001 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.92■□□□□ 0.62
MRPL3P09001 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.92■□□□□ 0.62
MRPL3P09001 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.91■□□□□ 0.62
MRPL3P09001 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL3P09001 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL3P09001 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL3P09001 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL3P09001 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
MRPL3P09001 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL3P09001 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.91■□□□□ 0.62
MRPL3P09001 GUSBP5-201ENST00000418136 578 ntBASIC18.91■□□□□ 0.62
MRPL3P09001 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL3P09001 AC092171.4-201ENST00000609130 632 ntBASIC18.91■□□□□ 0.62
MRPL3P09001 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL3P09001 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
MRPL3P09001 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL3P09001 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL3P09001 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL3P09001 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MRPL3P09001 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.91■□□□□ 0.62
MRPL3P09001 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.9■□□□□ 0.62
MRPL3P09001 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MRPL3P09001 LINC01006-201ENST00000333319 2292 ntBASIC18.9■□□□□ 0.62
MRPL3P09001 LINC01521-201ENST00000504184 1943 ntBASIC18.9■□□□□ 0.62
MRPL3P09001 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.9■□□□□ 0.62
MRPL3P09001 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MRPL3P09001 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
MRPL3P09001 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MRPL3P09001 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.9■□□□□ 0.62
MRPL3P09001 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MRPL3P09001 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.9■□□□□ 0.62
MRPL3P09001 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
MRPL3P09001 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.9■□□□□ 0.62
MRPL3P09001 AL049796.1-201ENST00000565336 1766 ntBASIC18.9■□□□□ 0.62
MRPL3P09001 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
MRPL3P09001 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MRPL3P09001 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.9■□□□□ 0.62
MRPL3P09001 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.9■□□□□ 0.62
MRPL3P09001 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MRPL3P09001 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
MRPL3P09001 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.62
MRPL3P09001 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MRPL3P09001 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MRPL3P09001 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MRPL3P09001 AL034346.1-201ENST00000568244 1277 ntBASIC18.89■□□□□ 0.61
MRPL3P09001 AL512631.2-201ENST00000604634 923 ntBASIC18.89■□□□□ 0.61
MRPL3P09001 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MRPL3P09001 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
MRPL3P09001 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MRPL3P09001 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MRPL3P09001 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL3P09001 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL3P09001 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL3P09001 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL3P09001 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.88■□□□□ 0.61
MRPL3P09001 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL3P09001 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MRPL3P09001 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL3P09001 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.88■□□□□ 0.61
MRPL3P09001 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL3P09001 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL3P09001 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
MRPL3P09001 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL3P09001 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL3P09001 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL3P09001 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL3P09001 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL3P09001 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL3P09001 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.88■□□□□ 0.61
MRPL3P09001 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.88■□□□□ 0.61
MRPL3P09001 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRPL3P09001 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRPL3P09001 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MRPL3P09001 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRPL3P09001 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRPL3P09001 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms