Protein–RNA interactions for Protein: P05090

APOD, Apolipoprotein D, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APODP05090 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
APODP05090 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APODP05090 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APODP05090 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APODP05090 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
APODP05090 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.49■■□□□ 1.03
APODP05090 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
APODP05090 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.49■■□□□ 1.03
APODP05090 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APODP05090 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
APODP05090 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.49■■□□□ 1.03
APODP05090 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.49■■□□□ 1.03
APODP05090 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
APODP05090 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
APODP05090 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.49■■□□□ 1.03
APODP05090 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
APODP05090 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APODP05090 AC061975.6-201ENST00000579045 1553 ntBASIC21.48■■□□□ 1.03
APODP05090 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
APODP05090 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
APODP05090 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
APODP05090 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
APODP05090 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.48■■□□□ 1.03
APODP05090 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.48■■□□□ 1.03
APODP05090 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.48■■□□□ 1.03
APODP05090 AL162412.1-201ENST00000567129 965 ntBASIC21.48■■□□□ 1.03
APODP05090 AC243732.1-201ENST00000612648 864 ntBASIC21.48■■□□□ 1.03
APODP05090 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.48■■□□□ 1.03
APODP05090 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
APODP05090 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
APODP05090 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.48■■□□□ 1.03
APODP05090 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.48■■□□□ 1.03
APODP05090 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
APODP05090 AC092053.2-201ENST00000640557 1818 ntBASIC21.48■■□□□ 1.03
APODP05090 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APODP05090 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
APODP05090 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
APODP05090 AC003102.1-202ENST00000563394 1796 ntBASIC21.47■■□□□ 1.03
APODP05090 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.47■■□□□ 1.03
APODP05090 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
APODP05090 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
APODP05090 BX276092.2-201ENST00000417668 665 ntBASIC21.47■■□□□ 1.03
APODP05090 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
APODP05090 AC092118.2-201ENST00000613495 667 ntBASIC21.47■■□□□ 1.03
APODP05090 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.47■■□□□ 1.03
APODP05090 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
APODP05090 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
APODP05090 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APODP05090 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.47■■□□□ 1.03
APODP05090 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
APODP05090 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
APODP05090 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
APODP05090 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
APODP05090 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.46■■□□□ 1.03
APODP05090 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.46■■□□□ 1.03
APODP05090 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.46■■□□□ 1.03
APODP05090 RNA5SP413-201ENST00000516373 109 ntBASIC21.46■■□□□ 1.03
APODP05090 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.46■■□□□ 1.03
APODP05090 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.46■■□□□ 1.03
APODP05090 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.46■■□□□ 1.03
APODP05090 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
APODP05090 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
APODP05090 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
APODP05090 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.45■■□□□ 1.02
APODP05090 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
APODP05090 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
APODP05090 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APODP05090 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.45■■□□□ 1.02
APODP05090 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
APODP05090 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
APODP05090 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.45■■□□□ 1.02
APODP05090 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APODP05090 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APODP05090 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
APODP05090 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
APODP05090 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
APODP05090 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
APODP05090 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
APODP05090 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
APODP05090 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.44■■□□□ 1.02
APODP05090 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
APODP05090 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.44■■□□□ 1.02
APODP05090 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.44■■□□□ 1.02
APODP05090 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
APODP05090 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
APODP05090 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.44■■□□□ 1.02
APODP05090 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
APODP05090 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.44■■□□□ 1.02
APODP05090 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.44■■□□□ 1.02
APODP05090 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
APODP05090 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
APODP05090 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.43■■□□□ 1.02
APODP05090 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
APODP05090 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
APODP05090 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.43■■□□□ 1.02
APODP05090 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
APODP05090 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.43■■□□□ 1.02
APODP05090 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.43■■□□□ 1.02
APODP05090 RARRES2P4-201ENST00000514074 484 ntBASIC21.43■■□□□ 1.02
APODP05090 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms