Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD74P04233 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CD74P04233 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.78■□□□□ 0.44
CD74P04233 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.78■□□□□ 0.44
CD74P04233 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.78■□□□□ 0.44
CD74P04233 AC068587.7-201ENST00000641602 218 ntBASIC17.78■□□□□ 0.44
CD74P04233 PLK5-205ENST00000642079 1969 ntBASIC17.78■□□□□ 0.44
CD74P04233 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD74P04233 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CD74P04233 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.78■□□□□ 0.44
CD74P04233 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.78■□□□□ 0.44
CD74P04233 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CD74P04233 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD74P04233 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD74P04233 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD74P04233 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD74P04233 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD74P04233 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CD74P04233 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.77■□□□□ 0.44
CD74P04233 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CD74P04233 AC003102.1-202ENST00000563394 1796 ntBASIC17.77■□□□□ 0.44
CD74P04233 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CD74P04233 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CD74P04233 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD74P04233 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CD74P04233 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.77■□□□□ 0.43
CD74P04233 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CD74P04233 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.77■□□□□ 0.43
CD74P04233 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CD74P04233 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.77■□□□□ 0.43
CD74P04233 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.76■□□□□ 0.43
CD74P04233 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CD74P04233 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.76■□□□□ 0.43
CD74P04233 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD74P04233 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.76■□□□□ 0.43
CD74P04233 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD74P04233 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CD74P04233 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.76■□□□□ 0.43
CD74P04233 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD74P04233 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD74P04233 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD74P04233 TSPY13P-201ENST00000338964 914 ntBASIC17.76■□□□□ 0.43
CD74P04233 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CD74P04233 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD74P04233 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.76■□□□□ 0.43
CD74P04233 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.76■□□□□ 0.43
CD74P04233 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD74P04233 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD74P04233 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CD74P04233 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.76■□□□□ 0.43
CD74P04233 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.76■□□□□ 0.43
CD74P04233 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CD74P04233 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CD74P04233 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD74P04233 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD74P04233 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD74P04233 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD74P04233 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD74P04233 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD74P04233 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD74P04233 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CD74P04233 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD74P04233 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD74P04233 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.75■□□□□ 0.43
CD74P04233 AFG3L1P-217ENST00000557444 2447 ntBASIC17.75■□□□□ 0.43
CD74P04233 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD74P04233 AL034346.1-201ENST00000568244 1277 ntBASIC17.75■□□□□ 0.43
CD74P04233 AL451085.2-201ENST00000605085 799 ntBASIC17.75■□□□□ 0.43
CD74P04233 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD74P04233 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD74P04233 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.75■□□□□ 0.43
CD74P04233 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.75■□□□□ 0.43
CD74P04233 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CD74P04233 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CD74P04233 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD74P04233 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD74P04233 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.74■□□□□ 0.43
CD74P04233 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD74P04233 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CD74P04233 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CD74P04233 AC133637.1-201ENST00000624115 1537 ntBASIC17.74■□□□□ 0.43
CD74P04233 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD74P04233 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CD74P04233 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CD74P04233 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD74P04233 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.74■□□□□ 0.43
CD74P04233 Z92544.1-202ENST00000571933 1220 ntBASIC17.74■□□□□ 0.43
CD74P04233 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD74P04233 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.74■□□□□ 0.43
CD74P04233 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.74■□□□□ 0.43
CD74P04233 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CD74P04233 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CD74P04233 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.74■□□□□ 0.43
CD74P04233 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CD74P04233 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.73■□□□□ 0.43
CD74P04233 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.73■□□□□ 0.43
CD74P04233 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CD74P04233 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD74P04233 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CD74P04233 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms