Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 MIR6722-201ENST00000617286 78 ntBASIC18.29■□□□□ 0.52
HLA-DQB1P01920 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB1P01920 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB1P01920 AC006128.1-201ENST00000624704 1661 ntBASIC18.28■□□□□ 0.52
HLA-DQB1P01920 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HLA-DQB1P01920 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DQB1P01920 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DQB1P01920 AC103724.3-201ENST00000564481 992 ntBASIC18.28■□□□□ 0.52
HLA-DQB1P01920 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.28■□□□□ 0.52
HLA-DQB1P01920 AC012354.3-201ENST00000623734 483 ntBASIC18.28■□□□□ 0.52
HLA-DQB1P01920 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB1P01920 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HLA-DQB1P01920 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HLA-DQB1P01920 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQB1P01920 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB1P01920 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB1P01920 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB1P01920 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB1P01920 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB1P01920 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB1P01920 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB1P01920 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB1P01920 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.27■□□□□ 0.52
HLA-DQB1P01920 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB1P01920 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
HLA-DQB1P01920 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQB1P01920 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
HLA-DQB1P01920 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
HLA-DQB1P01920 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DQB1P01920 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
HLA-DQB1P01920 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.27■□□□□ 0.51
HLA-DQB1P01920 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DQB1P01920 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.27■□□□□ 0.51
HLA-DQB1P01920 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 PCDHAC2-203ENST00000615316 3011 ntBASIC18.26■□□□□ 0.51
HLA-DQB1P01920 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 YBX1P4-201ENST00000392794 808 ntBASIC18.26■□□□□ 0.51
HLA-DQB1P01920 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DQB1P01920 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 AC079089.2-201ENST00000531211 1277 ntBASIC18.25■□□□□ 0.51
HLA-DQB1P01920 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.25■□□□□ 0.51
HLA-DQB1P01920 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB1P01920 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB1P01920 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB1P01920 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HLA-DQB1P01920 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.24■□□□□ 0.51
HLA-DQB1P01920 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-DQB1P01920 AL033527.3-201ENST00000566366 1196 ntBASIC18.24■□□□□ 0.51
HLA-DQB1P01920 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.24■□□□□ 0.51
HLA-DQB1P01920 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HLA-DQB1P01920 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms