Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOD1P00441 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOD1P00441 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOD1P00441 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.94■□□□□ 0.94
SOD1P00441 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.94■□□□□ 0.94
SOD1P00441 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
SOD1P00441 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOD1P00441 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SOD1P00441 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SOD1P00441 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SOD1P00441 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SOD1P00441 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.94■□□□□ 0.94
SOD1P00441 SLC7A5P2-201ENST00000553010 536 ntBASIC20.94■□□□□ 0.94
SOD1P00441 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.94■□□□□ 0.94
SOD1P00441 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SOD1P00441 AC011767.1-201ENST00000617410 1153 ntBASIC20.94■□□□□ 0.94
SOD1P00441 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SOD1P00441 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOD1P00441 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.94■□□□□ 0.94
SOD1P00441 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SOD1P00441 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SOD1P00441 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SOD1P00441 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SOD1P00441 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.93■□□□□ 0.94
SOD1P00441 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SOD1P00441 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SOD1P00441 CDCA4P2-201ENST00000441182 718 ntBASIC20.93■□□□□ 0.94
SOD1P00441 AC090192.1-201ENST00000517740 490 ntBASIC20.93■□□□□ 0.94
SOD1P00441 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SOD1P00441 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.93■□□□□ 0.94
SOD1P00441 AC073111.5-205ENST00000641717 521 ntBASIC20.93■□□□□ 0.94
SOD1P00441 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SOD1P00441 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SOD1P00441 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SOD1P00441 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SOD1P00441 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SOD1P00441 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOD1P00441 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOD1P00441 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOD1P00441 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOD1P00441 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOD1P00441 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOD1P00441 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOD1P00441 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOD1P00441 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.92■□□□□ 0.94
SOD1P00441 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SOD1P00441 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOD1P00441 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SOD1P00441 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SOD1P00441 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.92■□□□□ 0.94
SOD1P00441 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.92■□□□□ 0.94
SOD1P00441 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SOD1P00441 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SOD1P00441 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SOD1P00441 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.92■□□□□ 0.94
SOD1P00441 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.92■□□□□ 0.94
SOD1P00441 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.91■□□□□ 0.94
SOD1P00441 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SOD1P00441 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.91■□□□□ 0.94
SOD1P00441 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SOD1P00441 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.91■□□□□ 0.94
SOD1P00441 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
SOD1P00441 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SOD1P00441 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.91■□□□□ 0.94
SOD1P00441 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
SOD1P00441 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SOD1P00441 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SOD1P00441 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SOD1P00441 AC061975.6-201ENST00000579045 1553 ntBASIC20.91■□□□□ 0.94
SOD1P00441 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SOD1P00441 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.91■□□□□ 0.94
SOD1P00441 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SOD1P00441 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
SOD1P00441 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SOD1P00441 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
SOD1P00441 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SOD1P00441 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
SOD1P00441 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SOD1P00441 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SOD1P00441 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SOD1P00441 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SOD1P00441 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.9■□□□□ 0.94
SOD1P00441 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.9■□□□□ 0.94
SOD1P00441 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SOD1P00441 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SOD1P00441 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SOD1P00441 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SOD1P00441 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.89■□□□□ 0.94
SOD1P00441 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SOD1P00441 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SOD1P00441 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOD1P00441 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.89■□□□□ 0.93
SOD1P00441 DUX4L16-201ENST00000555130 1264 ntBASIC20.89■□□□□ 0.93
SOD1P00441 SLC7A5P1-201ENST00000568957 537 ntBASIC20.89■□□□□ 0.93
SOD1P00441 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOD1P00441 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.89■□□□□ 0.93
SOD1P00441 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOD1P00441 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SOD1P00441 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.89■□□□□ 0.93
SOD1P00441 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms