Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CSPG5O95196 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSPG5O95196 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CSPG5O95196 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CSPG5O95196 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CSPG5O95196 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.7■■□□□ 1.22
CSPG5O95196 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CSPG5O95196 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CSPG5O95196 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CSPG5O95196 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CSPG5O95196 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CSPG5O95196 AP006587.3-201ENST00000525742 1516 ntBASIC22.69■■□□□ 1.22
CSPG5O95196 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CSPG5O95196 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CSPG5O95196 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.69■■□□□ 1.22
CSPG5O95196 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.69■■□□□ 1.22
CSPG5O95196 AC006058.3-201ENST00000606217 1069 ntBASIC22.69■■□□□ 1.22
CSPG5O95196 AC092118.2-201ENST00000613495 667 ntBASIC22.69■■□□□ 1.22
CSPG5O95196 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CSPG5O95196 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CSPG5O95196 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CSPG5O95196 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CSPG5O95196 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSPG5O95196 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.68■■□□□ 1.22
CSPG5O95196 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSPG5O95196 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.68■■□□□ 1.22
CSPG5O95196 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSPG5O95196 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.68■■□□□ 1.22
CSPG5O95196 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSPG5O95196 EEF1DP3-203ENST00000566025 782 ntBASIC22.68■■□□□ 1.22
CSPG5O95196 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSPG5O95196 OR10C1-204ENST00000622521 1039 ntBASIC22.68■■□□□ 1.22
CSPG5O95196 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSPG5O95196 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSPG5O95196 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
CSPG5O95196 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSPG5O95196 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSPG5O95196 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSPG5O95196 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CSPG5O95196 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSPG5O95196 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CSPG5O95196 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.67■■□□□ 1.22
CSPG5O95196 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.67■■□□□ 1.22
CSPG5O95196 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CSPG5O95196 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSPG5O95196 AC012676.1-201ENST00000574705 1949 ntBASIC22.67■■□□□ 1.22
CSPG5O95196 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.67■■□□□ 1.22
CSPG5O95196 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSPG5O95196 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.66■■□□□ 1.22
CSPG5O95196 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CSPG5O95196 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CSPG5O95196 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSPG5O95196 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSPG5O95196 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CSPG5O95196 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
CSPG5O95196 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.66■■□□□ 1.22
CSPG5O95196 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.66■■□□□ 1.22
CSPG5O95196 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.66■■□□□ 1.22
CSPG5O95196 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.66■■□□□ 1.22
CSPG5O95196 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CSPG5O95196 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CSPG5O95196 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CSPG5O95196 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.66■■□□□ 1.22
CSPG5O95196 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CSPG5O95196 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSPG5O95196 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.66■■□□□ 1.22
CSPG5O95196 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSPG5O95196 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.65■■□□□ 1.22
CSPG5O95196 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSPG5O95196 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSPG5O95196 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CSPG5O95196 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CSPG5O95196 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.65■■□□□ 1.22
CSPG5O95196 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CSPG5O95196 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.65■■□□□ 1.22
CSPG5O95196 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.65■■□□□ 1.22
CSPG5O95196 AC097658.1-201ENST00000475555 843 ntBASIC22.65■■□□□ 1.22
CSPG5O95196 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.65■■□□□ 1.22
CSPG5O95196 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.65■■□□□ 1.22
CSPG5O95196 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.65■■□□□ 1.22
CSPG5O95196 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.65■■□□□ 1.22
CSPG5O95196 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CSPG5O95196 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.65■■□□□ 1.22
CSPG5O95196 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.65■■□□□ 1.22
CSPG5O95196 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSPG5O95196 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSPG5O95196 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSPG5O95196 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CSPG5O95196 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CSPG5O95196 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CSPG5O95196 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CSPG5O95196 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CSPG5O95196 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CSPG5O95196 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CSPG5O95196 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
CSPG5O95196 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.64■■□□□ 1.21
CSPG5O95196 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CSPG5O95196 GCSHP5-201ENST00000443090 522 ntBASIC22.64■■□□□ 1.21
CSPG5O95196 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CSPG5O95196 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms