Protein–RNA interactions for Protein: O94911

ABCA8, ATP-binding cassette sub-family A member 8, humanhuman

Predictions only

Length 1,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8O94911 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
ABCA8O94911 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
ABCA8O94911 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC33.38■■■□□ 2.93
ABCA8O94911 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC33.38■■■□□ 2.93
ABCA8O94911 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
ABCA8O94911 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC33.38■■■□□ 2.93
ABCA8O94911 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC33.38■■■□□ 2.93
ABCA8O94911 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC33.38■■■□□ 2.93
ABCA8O94911 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
ABCA8O94911 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC33.38■■■□□ 2.93
ABCA8O94911 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
ABCA8O94911 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC33.37■■■□□ 2.93
ABCA8O94911 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC33.37■■■□□ 2.93
ABCA8O94911 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC33.37■■■□□ 2.93
ABCA8O94911 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.93
ABCA8O94911 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
ABCA8O94911 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC33.37■■■□□ 2.93
ABCA8O94911 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
ABCA8O94911 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC33.37■■■□□ 2.93
ABCA8O94911 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC33.36■■■□□ 2.93
ABCA8O94911 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
ABCA8O94911 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
ABCA8O94911 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
ABCA8O94911 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
ABCA8O94911 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC33.35■■■□□ 2.93
ABCA8O94911 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC33.35■■■□□ 2.93
ABCA8O94911 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
ABCA8O94911 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC33.35■■■□□ 2.93
ABCA8O94911 AL355472.2-201ENST00000422958 438 ntBASIC33.35■■■□□ 2.93
ABCA8O94911 UBE2SP1-201ENST00000450587 669 ntBASIC33.35■■■□□ 2.93
ABCA8O94911 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC33.35■■■□□ 2.93
ABCA8O94911 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC33.35■■■□□ 2.93
ABCA8O94911 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC33.35■■■□□ 2.93
ABCA8O94911 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC33.35■■■□□ 2.93
ABCA8O94911 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
ABCA8O94911 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC33.34■■■□□ 2.93
ABCA8O94911 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
ABCA8O94911 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
ABCA8O94911 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
ABCA8O94911 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
ABCA8O94911 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC33.34■■■□□ 2.93
ABCA8O94911 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC33.34■■■□□ 2.93
ABCA8O94911 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
ABCA8O94911 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC33.34■■■□□ 2.93
ABCA8O94911 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
ABCA8O94911 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC33.33■■■□□ 2.93
ABCA8O94911 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC33.33■■■□□ 2.93
ABCA8O94911 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
ABCA8O94911 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC33.33■■■□□ 2.93
ABCA8O94911 AC137767.1-201ENST00000602918 1920 ntBASIC33.33■■■□□ 2.93
ABCA8O94911 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
ABCA8O94911 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
ABCA8O94911 NME6-213ENST00000451657 871 ntTSL 2 BASIC33.33■■■□□ 2.93
ABCA8O94911 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC33.33■■■□□ 2.93
ABCA8O94911 FAM21FP-204ENST00000608637 956 ntBASIC33.33■■■□□ 2.93
ABCA8O94911 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC33.33■■■□□ 2.93
ABCA8O94911 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC33.33■■■□□ 2.93
ABCA8O94911 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
ABCA8O94911 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
ABCA8O94911 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC33.32■■■□□ 2.92
ABCA8O94911 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC33.32■■■□□ 2.92
ABCA8O94911 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC33.32■■■□□ 2.92
ABCA8O94911 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
ABCA8O94911 CYP2T3P-201ENST00000601990 817 ntBASIC33.32■■■□□ 2.92
ABCA8O94911 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC33.31■■■□□ 2.92
ABCA8O94911 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC33.31■■■□□ 2.92
ABCA8O94911 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC33.31■■■□□ 2.92
ABCA8O94911 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC33.31■■■□□ 2.92
ABCA8O94911 AC091799.1-201ENST00000422823 811 ntBASIC33.31■■■□□ 2.92
ABCA8O94911 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC33.31■■■□□ 2.92
ABCA8O94911 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
ABCA8O94911 HLA-B-256ENST00000639848 1089 ntBASIC33.31■■■□□ 2.92
ABCA8O94911 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC33.31■■■□□ 2.92
ABCA8O94911 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
ABCA8O94911 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
ABCA8O94911 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC33.3■■■□□ 2.92
ABCA8O94911 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC33.3■■■□□ 2.92
ABCA8O94911 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
ABCA8O94911 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC33.3■■■□□ 2.92
ABCA8O94911 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC33.3■■■□□ 2.92
ABCA8O94911 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
ABCA8O94911 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
ABCA8O94911 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
ABCA8O94911 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
ABCA8O94911 RARG-204ENST00000543726 1779 ntTSL 2 BASIC33.3■■■□□ 2.92
ABCA8O94911 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC33.3■■■□□ 2.92
ABCA8O94911 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC33.3■■■□□ 2.92
ABCA8O94911 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
ABCA8O94911 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC33.3■■■□□ 2.92
ABCA8O94911 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
ABCA8O94911 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC33.29■■■□□ 2.92
ABCA8O94911 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
ABCA8O94911 LSM12P1-201ENST00000411836 588 ntBASIC33.29■■■□□ 2.92
ABCA8O94911 AC233263.1-201ENST00000578059 224 ntBASIC33.29■■■□□ 2.92
ABCA8O94911 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
ABCA8O94911 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
ABCA8O94911 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
ABCA8O94911 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC33.28■■■□□ 2.92
ABCA8O94911 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC33.28■■■□□ 2.92
ABCA8O94911 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC33.28■■■□□ 2.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms