Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLN5O75503 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLN5O75503 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.14■□□□□ 0.33
CLN5O75503 AC087289.5-201ENST00000586076 3175 ntBASIC17.14■□□□□ 0.33
CLN5O75503 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLN5O75503 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLN5O75503 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLN5O75503 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CLN5O75503 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLN5O75503 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.13■□□□□ 0.33
CLN5O75503 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLN5O75503 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLN5O75503 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CLN5O75503 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLN5O75503 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.13■□□□□ 0.33
CLN5O75503 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLN5O75503 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLN5O75503 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLN5O75503 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.13■□□□□ 0.33
CLN5O75503 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLN5O75503 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLN5O75503 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLN5O75503 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLN5O75503 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CLN5O75503 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.13■□□□□ 0.33
CLN5O75503 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.13■□□□□ 0.33
CLN5O75503 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.12■□□□□ 0.33
CLN5O75503 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLN5O75503 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.12■□□□□ 0.33
CLN5O75503 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 FAM99A-202ENST00000538190 1989 ntBASIC17.12■□□□□ 0.33
CLN5O75503 AC004687.1-201ENST00000579003 1625 ntBASIC17.12■□□□□ 0.33
CLN5O75503 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.12■□□□□ 0.33
CLN5O75503 MIR6724-1-201ENST00000616420 92 ntBASIC17.12■□□□□ 0.33
CLN5O75503 MIR6724-2-201ENST00000616483 92 ntBASIC17.12■□□□□ 0.33
CLN5O75503 MIR6724-4-201ENST00000617390 92 ntBASIC17.12■□□□□ 0.33
CLN5O75503 MIR6724-3-201ENST00000622482 92 ntBASIC17.12■□□□□ 0.33
CLN5O75503 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.12■□□□□ 0.33
CLN5O75503 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLN5O75503 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLN5O75503 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLN5O75503 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLN5O75503 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN5O75503 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN5O75503 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLN5O75503 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLN5O75503 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.11■□□□□ 0.33
CLN5O75503 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN5O75503 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLN5O75503 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.11■□□□□ 0.33
CLN5O75503 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN5O75503 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN5O75503 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLN5O75503 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLN5O75503 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CLN5O75503 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CLN5O75503 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLN5O75503 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLN5O75503 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLN5O75503 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLN5O75503 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.1■□□□□ 0.33
CLN5O75503 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLN5O75503 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.1■□□□□ 0.33
CLN5O75503 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLN5O75503 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLN5O75503 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CLN5O75503 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.1■□□□□ 0.33
CLN5O75503 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLN5O75503 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
CLN5O75503 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLN5O75503 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLN5O75503 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLN5O75503 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.1■□□□□ 0.33
CLN5O75503 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.1■□□□□ 0.33
CLN5O75503 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLN5O75503 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLN5O75503 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CLN5O75503 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CLN5O75503 LETM1P2-201ENST00000597330 2178 ntBASIC17.09■□□□□ 0.33
CLN5O75503 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.09■□□□□ 0.33
CLN5O75503 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLN5O75503 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.09■□□□□ 0.33
CLN5O75503 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLN5O75503 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.09■□□□□ 0.33
CLN5O75503 UNC93B8-201ENST00000511903 705 ntBASIC17.09■□□□□ 0.33
CLN5O75503 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.09■□□□□ 0.33
CLN5O75503 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms