Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.07■□□□□ 0.96
NDUFS3O75489 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFS3O75489 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFS3O75489 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFS3O75489 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFS3O75489 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.07■□□□□ 0.96
NDUFS3O75489 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.07■□□□□ 0.96
NDUFS3O75489 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.07■□□□□ 0.96
NDUFS3O75489 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFS3O75489 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDUFS3O75489 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NDUFS3O75489 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFS3O75489 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFS3O75489 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.06■□□□□ 0.96
NDUFS3O75489 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFS3O75489 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.06■□□□□ 0.96
NDUFS3O75489 MIR6084-201ENST00000622012 110 ntBASIC21.06■□□□□ 0.96
NDUFS3O75489 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.06■□□□□ 0.96
NDUFS3O75489 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.06■□□□□ 0.96
NDUFS3O75489 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFS3O75489 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDUFS3O75489 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFS3O75489 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFS3O75489 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.05■□□□□ 0.96
NDUFS3O75489 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFS3O75489 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFS3O75489 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFS3O75489 AL137060.1-201ENST00000618151 2648 ntBASIC21.05■□□□□ 0.96
NDUFS3O75489 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFS3O75489 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFS3O75489 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.05■□□□□ 0.96
NDUFS3O75489 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NDUFS3O75489 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFS3O75489 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDUFS3O75489 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.04■□□□□ 0.96
NDUFS3O75489 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.04■□□□□ 0.96
NDUFS3O75489 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFS3O75489 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.04■□□□□ 0.96
NDUFS3O75489 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFS3O75489 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.04■□□□□ 0.96
NDUFS3O75489 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFS3O75489 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.04■□□□□ 0.96
NDUFS3O75489 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFS3O75489 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFS3O75489 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.04■□□□□ 0.96
NDUFS3O75489 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFS3O75489 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDUFS3O75489 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NDUFS3O75489 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.03■□□□□ 0.96
NDUFS3O75489 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFS3O75489 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFS3O75489 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFS3O75489 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NDUFS3O75489 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.03■□□□□ 0.96
NDUFS3O75489 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NDUFS3O75489 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NDUFS3O75489 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFS3O75489 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.03■□□□□ 0.96
NDUFS3O75489 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NDUFS3O75489 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NDUFS3O75489 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.03■□□□□ 0.96
NDUFS3O75489 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFS3O75489 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.02■□□□□ 0.96
NDUFS3O75489 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NDUFS3O75489 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFS3O75489 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.02■□□□□ 0.96
NDUFS3O75489 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFS3O75489 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFS3O75489 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFS3O75489 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFS3O75489 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDUFS3O75489 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NDUFS3O75489 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NDUFS3O75489 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
NDUFS3O75489 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
NDUFS3O75489 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
NDUFS3O75489 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFS3O75489 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.01■□□□□ 0.95
NDUFS3O75489 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFS3O75489 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.01■□□□□ 0.95
NDUFS3O75489 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NDUFS3O75489 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.01■□□□□ 0.95
NDUFS3O75489 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.01■□□□□ 0.95
NDUFS3O75489 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFS3O75489 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFS3O75489 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFS3O75489 TPRG1LP1-201ENST00000598702 760 ntBASIC21.01■□□□□ 0.95
NDUFS3O75489 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.01■□□□□ 0.95
NDUFS3O75489 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NDUFS3O75489 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.01■□□□□ 0.95
NDUFS3O75489 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFS3O75489 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS3O75489 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21■□□□□ 0.95
NDUFS3O75489 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21■□□□□ 0.95
NDUFS3O75489 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NDUFS3O75489 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS3O75489 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21■□□□□ 0.95
NDUFS3O75489 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21■□□□□ 0.95
NDUFS3O75489 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFS3O75489 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms