Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM3O75382 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM3O75382 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 AC005224.4-201ENST00000583262 1652 ntBASIC19.63■□□□□ 0.73
TRIM3O75382 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
TRIM3O75382 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM3O75382 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 NTF6G-201ENST00000591094 616 ntBASIC19.63■□□□□ 0.73
TRIM3O75382 AC092666.2-201ENST00000613287 246 ntBASIC19.63■□□□□ 0.73
TRIM3O75382 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM3O75382 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
TRIM3O75382 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM3O75382 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM3O75382 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRIM3O75382 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM3O75382 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM3O75382 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM3O75382 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM3O75382 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRIM3O75382 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM3O75382 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM3O75382 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM3O75382 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM3O75382 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRIM3O75382 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM3O75382 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.62■□□□□ 0.73
TRIM3O75382 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM3O75382 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM3O75382 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
TRIM3O75382 AP004607.7-201ENST00000527152 1677 ntBASIC19.62■□□□□ 0.73
TRIM3O75382 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM3O75382 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
TRIM3O75382 AC139530.1-201ENST00000575312 1977 ntBASIC19.61■□□□□ 0.73
TRIM3O75382 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TRIM3O75382 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM3O75382 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRIM3O75382 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
TRIM3O75382 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM3O75382 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM3O75382 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM3O75382 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM3O75382 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM3O75382 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM3O75382 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM3O75382 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM3O75382 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRIM3O75382 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM3O75382 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM3O75382 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM3O75382 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM3O75382 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM3O75382 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM3O75382 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM3O75382 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.6■□□□□ 0.73
TRIM3O75382 AL034346.1-201ENST00000568244 1277 ntBASIC19.6■□□□□ 0.73
TRIM3O75382 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM3O75382 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM3O75382 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM3O75382 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM3O75382 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM3O75382 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM3O75382 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM3O75382 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM3O75382 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM3O75382 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRIM3O75382 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM3O75382 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM3O75382 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM3O75382 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM3O75382 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM3O75382 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM3O75382 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRIM3O75382 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM3O75382 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM3O75382 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM3O75382 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM3O75382 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM3O75382 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM3O75382 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRIM3O75382 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM3O75382 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms