Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE3O75131 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
CPNE3O75131 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE3O75131 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.23■□□□□ 0.83
CPNE3O75131 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE3O75131 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE3O75131 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE3O75131 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE3O75131 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE3O75131 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE3O75131 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE3O75131 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE3O75131 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.23■□□□□ 0.83
CPNE3O75131 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.23■□□□□ 0.83
CPNE3O75131 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CPNE3O75131 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE3O75131 AC231657.2-201ENST00000624556 255 ntBASIC20.23■□□□□ 0.83
CPNE3O75131 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE3O75131 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE3O75131 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE3O75131 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE3O75131 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE3O75131 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE3O75131 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE3O75131 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE3O75131 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.22■□□□□ 0.83
CPNE3O75131 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE3O75131 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE3O75131 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CPNE3O75131 KRT18P20-201ENST00000548986 1279 ntBASIC20.22■□□□□ 0.83
CPNE3O75131 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
CPNE3O75131 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE3O75131 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE3O75131 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CPNE3O75131 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE3O75131 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE3O75131 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.21■□□□□ 0.83
CPNE3O75131 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.21■□□□□ 0.83
CPNE3O75131 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.21■□□□□ 0.83
CPNE3O75131 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE3O75131 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CPNE3O75131 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.21■□□□□ 0.83
CPNE3O75131 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CPNE3O75131 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE3O75131 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.21■□□□□ 0.83
CPNE3O75131 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.21■□□□□ 0.83
CPNE3O75131 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.21■□□□□ 0.83
CPNE3O75131 AC104771.1-201ENST00000603335 964 ntBASIC20.21■□□□□ 0.83
CPNE3O75131 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.21■□□□□ 0.83
CPNE3O75131 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE3O75131 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE3O75131 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CPNE3O75131 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE3O75131 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE3O75131 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE3O75131 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CPNE3O75131 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.2■□□□□ 0.82
CPNE3O75131 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE3O75131 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE3O75131 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
CPNE3O75131 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CPNE3O75131 NCF1B-203ENST00000435988 1254 ntBASIC20.2■□□□□ 0.82
CPNE3O75131 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE3O75131 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.2■□□□□ 0.82
CPNE3O75131 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
CPNE3O75131 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.2■□□□□ 0.82
CPNE3O75131 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.2■□□□□ 0.82
CPNE3O75131 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CPNE3O75131 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE3O75131 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE3O75131 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE3O75131 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE3O75131 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.2■□□□□ 0.82
CPNE3O75131 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE3O75131 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE3O75131 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CPNE3O75131 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE3O75131 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CPNE3O75131 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CPNE3O75131 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE3O75131 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE3O75131 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE3O75131 AC007322.1-201ENST00000426983 750 ntBASIC20.19■□□□□ 0.82
CPNE3O75131 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CPNE3O75131 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.19■□□□□ 0.82
CPNE3O75131 DUX4L16-201ENST00000555130 1264 ntBASIC20.19■□□□□ 0.82
CPNE3O75131 EEF1DP3-203ENST00000566025 782 ntBASIC20.19■□□□□ 0.82
CPNE3O75131 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CPNE3O75131 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CPNE3O75131 AL109923.1-201ENST00000618799 583 ntBASIC20.19■□□□□ 0.82
CPNE3O75131 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE3O75131 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE3O75131 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE3O75131 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.19■□□□□ 0.82
CPNE3O75131 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.19■□□□□ 0.82
CPNE3O75131 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CPNE3O75131 EP400NL-214ENST00000641289 2402 ntBASIC20.18■□□□□ 0.82
CPNE3O75131 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE3O75131 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE3O75131 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms