Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.33■□□□□ 0.84
SLC28A2O43868 FBXW4P1-201ENST00000426721 2239 ntBASIC20.33■□□□□ 0.84
SLC28A2O43868 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC28A2O43868 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC28A2O43868 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SLC28A2O43868 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC28A2O43868 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SLC28A2O43868 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC28A2O43868 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC28A2O43868 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC28A2O43868 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC28A2O43868 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SLC28A2O43868 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
SLC28A2O43868 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.32■□□□□ 0.84
SLC28A2O43868 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC28A2O43868 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
SLC28A2O43868 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC28A2O43868 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC28A2O43868 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC28A2O43868 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC28A2O43868 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC28A2O43868 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC28A2O43868 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC28A2O43868 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC28A2O43868 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
SLC28A2O43868 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC28A2O43868 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC28A2O43868 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC28A2O43868 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SLC28A2O43868 AC008687.6-201ENST00000596318 630 ntBASIC20.31■□□□□ 0.84
SLC28A2O43868 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC28A2O43868 AC087239.1-201ENST00000622671 572 ntBASIC20.31■□□□□ 0.84
SLC28A2O43868 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC28A2O43868 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC28A2O43868 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SLC28A2O43868 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC28A2O43868 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC28A2O43868 AC004854.2-201ENST00000608450 1441 ntBASIC20.3■□□□□ 0.84
SLC28A2O43868 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC28A2O43868 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC28A2O43868 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC28A2O43868 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SLC28A2O43868 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC28A2O43868 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC28A2O43868 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC28A2O43868 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SLC28A2O43868 AL121832.2-201ENST00000610979 668 ntBASIC20.3■□□□□ 0.84
SLC28A2O43868 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC28A2O43868 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC28A2O43868 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.3■□□□□ 0.84
SLC28A2O43868 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC28A2O43868 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC28A2O43868 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC28A2O43868 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC28A2O43868 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC28A2O43868 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC28A2O43868 KRT19P1-201ENST00000405746 1186 ntBASIC20.29■□□□□ 0.84
SLC28A2O43868 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC28A2O43868 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC28A2O43868 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC28A2O43868 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC28A2O43868 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC28A2O43868 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC28A2O43868 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SLC28A2O43868 AP004607.4-201ENST00000530158 1459 ntBASIC20.29■□□□□ 0.84
SLC28A2O43868 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC28A2O43868 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC28A2O43868 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC28A2O43868 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.29■□□□□ 0.84
SLC28A2O43868 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC28A2O43868 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC28A2O43868 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC28A2O43868 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SLC28A2O43868 AC133637.1-201ENST00000624115 1537 ntBASIC20.28■□□□□ 0.84
SLC28A2O43868 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
SLC28A2O43868 KRT18P11-201ENST00000435214 1283 ntBASIC20.28■□□□□ 0.84
SLC28A2O43868 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.28■□□□□ 0.84
SLC28A2O43868 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC28A2O43868 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC28A2O43868 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC28A2O43868 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC28A2O43868 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC28A2O43868 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC28A2O43868 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC28A2O43868 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC28A2O43868 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC28A2O43868 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC28A2O43868 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC28A2O43868 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SLC28A2O43868 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC28A2O43868 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SLC28A2O43868 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC28A2O43868 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC28A2O43868 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
SLC28A2O43868 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
SLC28A2O43868 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC28A2O43868 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SLC28A2O43868 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC28A2O43868 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC28A2O43868 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms