Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.18■■□□□ 1.3
CCP110O43303 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CCP110O43303 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCP110O43303 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCP110O43303 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.17■■□□□ 1.3
CCP110O43303 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCP110O43303 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CCP110O43303 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.17■■□□□ 1.3
CCP110O43303 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
CCP110O43303 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCP110O43303 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCP110O43303 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.17■■□□□ 1.3
CCP110O43303 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCP110O43303 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CCP110O43303 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.17■■□□□ 1.3
CCP110O43303 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.17■■□□□ 1.3
CCP110O43303 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CCP110O43303 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CCP110O43303 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCP110O43303 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.16■■□□□ 1.3
CCP110O43303 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.16■■□□□ 1.3
CCP110O43303 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCP110O43303 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCP110O43303 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CCP110O43303 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC23.16■■□□□ 1.3
CCP110O43303 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCP110O43303 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCP110O43303 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCP110O43303 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCP110O43303 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.16■■□□□ 1.3
CCP110O43303 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.16■■□□□ 1.3
CCP110O43303 AC131281.2-201ENST00000520478 145 ntBASIC23.16■■□□□ 1.3
CCP110O43303 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCP110O43303 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCP110O43303 AC099791.2-201ENST00000605725 427 ntBASIC23.16■■□□□ 1.3
CCP110O43303 MIR4466-201ENST00000606121 54 ntBASIC23.16■■□□□ 1.3
CCP110O43303 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCP110O43303 AC241377.3-202ENST00000626088 1088 ntBASIC23.16■■□□□ 1.3
CCP110O43303 AC241585.3-202ENST00000628937 1088 ntBASIC23.16■■□□□ 1.3
CCP110O43303 AC245100.8-202ENST00000629247 1058 ntBASIC23.16■■□□□ 1.3
CCP110O43303 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCP110O43303 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCP110O43303 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
CCP110O43303 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.16■■□□□ 1.3
CCP110O43303 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.16■■□□□ 1.3
CCP110O43303 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCP110O43303 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.15■■□□□ 1.3
CCP110O43303 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCP110O43303 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCP110O43303 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.15■■□□□ 1.3
CCP110O43303 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCP110O43303 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCP110O43303 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.15■■□□□ 1.3
CCP110O43303 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCP110O43303 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.15■■□□□ 1.3
CCP110O43303 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCP110O43303 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
CCP110O43303 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCP110O43303 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCP110O43303 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCP110O43303 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCP110O43303 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCP110O43303 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.14■■□□□ 1.3
CCP110O43303 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.14■■□□□ 1.3
CCP110O43303 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCP110O43303 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCP110O43303 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.14■■□□□ 1.29
CCP110O43303 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCP110O43303 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCP110O43303 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.14■■□□□ 1.29
CCP110O43303 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCP110O43303 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.13■■□□□ 1.29
CCP110O43303 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCP110O43303 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCP110O43303 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
CCP110O43303 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CCP110O43303 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCP110O43303 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.13■■□□□ 1.29
CCP110O43303 SRD5A1P1-201ENST00000442297 786 ntBASIC23.13■■□□□ 1.29
CCP110O43303 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.13■■□□□ 1.29
CCP110O43303 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.13■■□□□ 1.29
CCP110O43303 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCP110O43303 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCP110O43303 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.13■■□□□ 1.29
CCP110O43303 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CCP110O43303 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCP110O43303 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCP110O43303 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CCP110O43303 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.13■■□□□ 1.29
CCP110O43303 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.13■■□□□ 1.29
CCP110O43303 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCP110O43303 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CCP110O43303 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.12■■□□□ 1.29
CCP110O43303 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CCP110O43303 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCP110O43303 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCP110O43303 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CCP110O43303 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCP110O43303 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCP110O43303 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms