Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBFD1O14562 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.54■□□□□ 0.88
UBFD1O14562 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.54■□□□□ 0.88
UBFD1O14562 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.54■□□□□ 0.88
UBFD1O14562 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBFD1O14562 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBFD1O14562 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.54■□□□□ 0.88
UBFD1O14562 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
UBFD1O14562 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBFD1O14562 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBFD1O14562 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
UBFD1O14562 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBFD1O14562 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBFD1O14562 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBFD1O14562 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBFD1O14562 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBFD1O14562 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.53■□□□□ 0.88
UBFD1O14562 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBFD1O14562 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
UBFD1O14562 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBFD1O14562 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBFD1O14562 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.53■□□□□ 0.88
UBFD1O14562 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.53■□□□□ 0.88
UBFD1O14562 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBFD1O14562 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.53■□□□□ 0.88
UBFD1O14562 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
UBFD1O14562 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBFD1O14562 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBFD1O14562 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBFD1O14562 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBFD1O14562 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBFD1O14562 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.52■□□□□ 0.88
UBFD1O14562 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBFD1O14562 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBFD1O14562 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBFD1O14562 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
UBFD1O14562 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBFD1O14562 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.52■□□□□ 0.88
UBFD1O14562 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.52■□□□□ 0.88
UBFD1O14562 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBFD1O14562 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBFD1O14562 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.52■□□□□ 0.87
UBFD1O14562 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
UBFD1O14562 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.51■□□□□ 0.87
UBFD1O14562 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.51■□□□□ 0.87
UBFD1O14562 LINC01521-201ENST00000504184 1943 ntBASIC20.51■□□□□ 0.87
UBFD1O14562 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBFD1O14562 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBFD1O14562 LINC01006-201ENST00000333319 2292 ntBASIC20.51■□□□□ 0.87
UBFD1O14562 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
UBFD1O14562 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBFD1O14562 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.51■□□□□ 0.87
UBFD1O14562 AC024257.2-201ENST00000549699 147 ntBASIC20.51■□□□□ 0.87
UBFD1O14562 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.51■□□□□ 0.87
UBFD1O14562 AC233992.3-201ENST00000607491 485 ntBASIC20.51■□□□□ 0.87
UBFD1O14562 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.51■□□□□ 0.87
UBFD1O14562 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
UBFD1O14562 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBFD1O14562 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBFD1O14562 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
UBFD1O14562 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBFD1O14562 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBFD1O14562 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBFD1O14562 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBFD1O14562 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBFD1O14562 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.5■□□□□ 0.87
UBFD1O14562 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
UBFD1O14562 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
UBFD1O14562 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
UBFD1O14562 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBFD1O14562 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBFD1O14562 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBFD1O14562 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.5■□□□□ 0.87
UBFD1O14562 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBFD1O14562 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.49■□□□□ 0.87
UBFD1O14562 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBFD1O14562 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBFD1O14562 FEM1AP1-201ENST00000431297 1995 ntBASIC20.49■□□□□ 0.87
UBFD1O14562 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.49■□□□□ 0.87
UBFD1O14562 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.49■□□□□ 0.87
UBFD1O14562 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBFD1O14562 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBFD1O14562 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBFD1O14562 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBFD1O14562 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBFD1O14562 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.49■□□□□ 0.87
UBFD1O14562 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.49■□□□□ 0.87
UBFD1O14562 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBFD1O14562 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBFD1O14562 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
UBFD1O14562 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBFD1O14562 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBFD1O14562 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBFD1O14562 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBFD1O14562 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.48■□□□□ 0.87
UBFD1O14562 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBFD1O14562 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.48■□□□□ 0.87
UBFD1O14562 AL136162.1-201ENST00000607711 1078 ntBASIC20.48■□□□□ 0.87
UBFD1O14562 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBFD1O14562 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms