Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF223E7ERA6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF223E7ERA6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RNF223E7ERA6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF223E7ERA6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF223E7ERA6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF223E7ERA6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF223E7ERA6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF223E7ERA6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.59■□□□□ 0.41
RNF223E7ERA6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF223E7ERA6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.59■□□□□ 0.41
RNF223E7ERA6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF223E7ERA6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF223E7ERA6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF223E7ERA6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF223E7ERA6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF223E7ERA6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.58■□□□□ 0.41
RNF223E7ERA6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RNF223E7ERA6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
RNF223E7ERA6 RBM17P2-201ENST00000616397 1405 ntBASIC17.58■□□□□ 0.41
RNF223E7ERA6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF223E7ERA6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RNF223E7ERA6 UNC93B4-201ENST00000505679 747 ntBASIC17.58■□□□□ 0.4
RNF223E7ERA6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF223E7ERA6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF223E7ERA6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF223E7ERA6 AC244517.3-201ENST00000616254 1235 ntBASIC17.58■□□□□ 0.4
RNF223E7ERA6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF223E7ERA6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
RNF223E7ERA6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF223E7ERA6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF223E7ERA6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF223E7ERA6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF223E7ERA6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF223E7ERA6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF223E7ERA6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF223E7ERA6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF223E7ERA6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF223E7ERA6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF223E7ERA6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF223E7ERA6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF223E7ERA6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF223E7ERA6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RNF223E7ERA6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF223E7ERA6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF223E7ERA6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF223E7ERA6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF223E7ERA6 LSM12P1-201ENST00000411836 588 ntBASIC17.56■□□□□ 0.4
RNF223E7ERA6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF223E7ERA6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF223E7ERA6 AC026366.1-201ENST00000488803 879 ntBASIC17.56■□□□□ 0.4
RNF223E7ERA6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF223E7ERA6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RNF223E7ERA6 AL162412.1-201ENST00000567129 965 ntBASIC17.56■□□□□ 0.4
RNF223E7ERA6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF223E7ERA6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RNF223E7ERA6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF223E7ERA6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF223E7ERA6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF223E7ERA6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF223E7ERA6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF223E7ERA6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 KRT16P2-201ENST00000414673 1423 ntBASIC17.55■□□□□ 0.4
RNF223E7ERA6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF223E7ERA6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 UNC93B5-201ENST00000530315 699 ntBASIC17.55■□□□□ 0.4
RNF223E7ERA6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF223E7ERA6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF223E7ERA6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF223E7ERA6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF223E7ERA6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 AC073648.6-201ENST00000641589 218 ntBASIC17.55■□□□□ 0.4
RNF223E7ERA6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF223E7ERA6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF223E7ERA6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF223E7ERA6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF223E7ERA6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF223E7ERA6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF223E7ERA6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RNF223E7ERA6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.54■□□□□ 0.4
RNF223E7ERA6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.54■□□□□ 0.4
RNF223E7ERA6 AP003097.1-201ENST00000530657 1135 ntBASIC17.54■□□□□ 0.4
RNF223E7ERA6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF223E7ERA6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF223E7ERA6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF223E7ERA6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms