Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TVP23AA6NH52 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TVP23AA6NH52 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
TVP23AA6NH52 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TVP23AA6NH52 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TVP23AA6NH52 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TVP23AA6NH52 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TVP23AA6NH52 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
TVP23AA6NH52 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TVP23AA6NH52 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TVP23AA6NH52 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
TVP23AA6NH52 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TVP23AA6NH52 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TVP23AA6NH52 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TVP23AA6NH52 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TVP23AA6NH52 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TVP23AA6NH52 BX842568.3-201ENST00000418104 571 ntBASIC18.83■□□□□ 0.6
TVP23AA6NH52 AC024257.2-201ENST00000549699 147 ntBASIC18.83■□□□□ 0.6
TVP23AA6NH52 AL136162.1-201ENST00000607711 1078 ntBASIC18.83■□□□□ 0.6
TVP23AA6NH52 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TVP23AA6NH52 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TVP23AA6NH52 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.83■□□□□ 0.6
TVP23AA6NH52 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TVP23AA6NH52 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.83■□□□□ 0.6
TVP23AA6NH52 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TVP23AA6NH52 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TVP23AA6NH52 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TVP23AA6NH52 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TVP23AA6NH52 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TVP23AA6NH52 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TVP23AA6NH52 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TVP23AA6NH52 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TVP23AA6NH52 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TVP23AA6NH52 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TVP23AA6NH52 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.82■□□□□ 0.6
TVP23AA6NH52 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TVP23AA6NH52 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TVP23AA6NH52 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TVP23AA6NH52 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TVP23AA6NH52 AP006587.3-201ENST00000525742 1516 ntBASIC18.81■□□□□ 0.6
TVP23AA6NH52 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TVP23AA6NH52 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TVP23AA6NH52 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TVP23AA6NH52 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 AC126544.1-201ENST00000580842 1059 ntBASIC18.81■□□□□ 0.6
TVP23AA6NH52 SMUG1P1-201ENST00000590640 811 ntBASIC18.81■□□□□ 0.6
TVP23AA6NH52 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TVP23AA6NH52 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TVP23AA6NH52 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TVP23AA6NH52 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TVP23AA6NH52 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TVP23AA6NH52 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TVP23AA6NH52 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.81■□□□□ 0.6
TVP23AA6NH52 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TVP23AA6NH52 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TVP23AA6NH52 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TVP23AA6NH52 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.8■□□□□ 0.6
TVP23AA6NH52 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TVP23AA6NH52 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TVP23AA6NH52 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TVP23AA6NH52 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TVP23AA6NH52 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TVP23AA6NH52 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TVP23AA6NH52 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TVP23AA6NH52 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TVP23AA6NH52 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.8■□□□□ 0.6
TVP23AA6NH52 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.8■□□□□ 0.6
TVP23AA6NH52 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.8■□□□□ 0.6
TVP23AA6NH52 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TVP23AA6NH52 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.8■□□□□ 0.6
TVP23AA6NH52 AC233992.3-201ENST00000607491 485 ntBASIC18.8■□□□□ 0.6
TVP23AA6NH52 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.8■□□□□ 0.6
TVP23AA6NH52 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.8■□□□□ 0.6
TVP23AA6NH52 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TVP23AA6NH52 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TVP23AA6NH52 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TVP23AA6NH52 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.8■□□□□ 0.6
TVP23AA6NH52 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TVP23AA6NH52 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TVP23AA6NH52 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.79■□□□□ 0.6
TVP23AA6NH52 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TVP23AA6NH52 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TVP23AA6NH52 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TVP23AA6NH52 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TVP23AA6NH52 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.79■□□□□ 0.6
TVP23AA6NH52 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms