Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM43BA6NCK2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM43BA6NCK2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.31■■□□□ 1.32
TRIM43BA6NCK2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.31■■□□□ 1.32
TRIM43BA6NCK2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM43BA6NCK2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM43BA6NCK2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM43BA6NCK2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM43BA6NCK2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM43BA6NCK2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.31■■□□□ 1.32
TRIM43BA6NCK2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 MIR718-201ENST00000390190 70 ntBASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 LSM12P1-201ENST00000411836 588 ntBASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM43BA6NCK2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.29■■□□□ 1.32
TRIM43BA6NCK2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM43BA6NCK2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM43BA6NCK2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM43BA6NCK2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.29■■□□□ 1.32
TRIM43BA6NCK2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.29■■□□□ 1.32
TRIM43BA6NCK2 RPPH1-201ENST00000516869 333 ntBASIC23.29■■□□□ 1.32
TRIM43BA6NCK2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.29■■□□□ 1.32
TRIM43BA6NCK2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.29■■□□□ 1.32
TRIM43BA6NCK2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TRIM43BA6NCK2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
TRIM43BA6NCK2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.29■■□□□ 1.32
TRIM43BA6NCK2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 POU5F1P4-201ENST00000413175 1085 ntBASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 Z99916.2-201ENST00000604037 246 ntBASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM43BA6NCK2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM43BA6NCK2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM43BA6NCK2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
TRIM43BA6NCK2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM43BA6NCK2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.27■■□□□ 1.32
TRIM43BA6NCK2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.27■■□□□ 1.32
TRIM43BA6NCK2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.27■■□□□ 1.32
TRIM43BA6NCK2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.27■■□□□ 1.32
TRIM43BA6NCK2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.27■■□□□ 1.32
TRIM43BA6NCK2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM43BA6NCK2 KRT17P1-201ENST00000399211 1546 ntBASIC23.27■■□□□ 1.32
TRIM43BA6NCK2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
TRIM43BA6NCK2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM43BA6NCK2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 C1QBPP2-201ENST00000528754 825 ntBASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 AC010331.1-201ENST00000611423 582 ntBASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 REXO1L12P-201ENST00000622156 912 ntBASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 FAM197Y4-202ENST00000622692 608 ntBASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM43BA6NCK2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM43BA6NCK2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.25■■□□□ 1.31
TRIM43BA6NCK2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM43BA6NCK2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM43BA6NCK2 AL355472.2-201ENST00000422958 438 ntBASIC23.25■■□□□ 1.31
TRIM43BA6NCK2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.25■■□□□ 1.31
TRIM43BA6NCK2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.25■■□□□ 1.31
TRIM43BA6NCK2 AC243732.1-201ENST00000612648 864 ntBASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms