Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC30.63■■■□□ 2.49
CCDC144AA2RUR9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC144AA2RUR9 MARS-234ENST00000630571 216 ntTSL 5 BASIC30.63■■■□□ 2.49
CCDC144AA2RUR9 MARS-235ENST00000630803 183 ntTSL 3 BASIC30.63■■■□□ 2.49
CCDC144AA2RUR9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC144AA2RUR9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC30.62■■■□□ 2.49
CCDC144AA2RUR9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC144AA2RUR9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC144AA2RUR9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC30.62■■■□□ 2.49
CCDC144AA2RUR9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
CCDC144AA2RUR9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC144AA2RUR9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC144AA2RUR9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC30.62■■■□□ 2.49
CCDC144AA2RUR9 AC243732.1-201ENST00000612648 864 ntBASIC30.62■■■□□ 2.49
CCDC144AA2RUR9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC30.62■■■□□ 2.49
CCDC144AA2RUR9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC144AA2RUR9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
CCDC144AA2RUR9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC144AA2RUR9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC144AA2RUR9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC144AA2RUR9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC30.61■■■□□ 2.49
CCDC144AA2RUR9 AC069152.1-201ENST00000438030 544 ntBASIC30.61■■■□□ 2.49
CCDC144AA2RUR9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC30.61■■■□□ 2.49
CCDC144AA2RUR9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC144AA2RUR9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC30.61■■■□□ 2.49
CCDC144AA2RUR9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
CCDC144AA2RUR9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
CCDC144AA2RUR9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC144AA2RUR9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC30.6■■■□□ 2.49
CCDC144AA2RUR9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC144AA2RUR9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC144AA2RUR9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC144AA2RUR9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC144AA2RUR9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
CCDC144AA2RUR9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
CCDC144AA2RUR9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
CCDC144AA2RUR9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
CCDC144AA2RUR9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC30.59■■■□□ 2.49
CCDC144AA2RUR9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
CCDC144AA2RUR9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC30.59■■■□□ 2.49
CCDC144AA2RUR9 OR10C1-204ENST00000622521 1039 ntBASIC30.59■■■□□ 2.49
CCDC144AA2RUR9 AC010542.4-201ENST00000563151 1910 ntBASIC30.59■■■□□ 2.49
CCDC144AA2RUR9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
CCDC144AA2RUR9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC144AA2RUR9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC30.59■■■□□ 2.49
CCDC144AA2RUR9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC144AA2RUR9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC30.58■■■□□ 2.49
CCDC144AA2RUR9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC144AA2RUR9 AC093787.1-201ENST00000450396 207 ntBASIC30.58■■■□□ 2.49
CCDC144AA2RUR9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC144AA2RUR9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC30.58■■■□□ 2.49
CCDC144AA2RUR9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC144AA2RUR9 AC016405.3-201ENST00000607710 860 ntBASIC30.58■■■□□ 2.49
CCDC144AA2RUR9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC30.58■■■□□ 2.49
CCDC144AA2RUR9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC144AA2RUR9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC144AA2RUR9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC144AA2RUR9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CCDC144AA2RUR9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC30.57■■■□□ 2.48
CCDC144AA2RUR9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
CCDC144AA2RUR9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
CCDC144AA2RUR9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC30.57■■■□□ 2.48
CCDC144AA2RUR9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC30.57■■■□□ 2.48
CCDC144AA2RUR9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CCDC144AA2RUR9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC30.57■■■□□ 2.48
CCDC144AA2RUR9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 AC073210.2-201ENST00000430369 194 ntBASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 AL162412.1-201ENST00000567129 965 ntBASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 AC069236.1-201ENST00000604339 616 ntBASIC30.56■■■□□ 2.48
CCDC144AA2RUR9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC144AA2RUR9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC144AA2RUR9 MKRN4P-201ENST00000444706 1521 ntBASIC30.55■■■□□ 2.48
CCDC144AA2RUR9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC30.55■■■□□ 2.48
CCDC144AA2RUR9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC144AA2RUR9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC144AA2RUR9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC30.55■■■□□ 2.48
CCDC144AA2RUR9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 CD99P1-205ENST00000527459 561 ntBASIC30.54■■■□□ 2.48
CCDC144AA2RUR9 KRT18P6-201ENST00000555540 1265 ntBASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms