Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.71■□□□□ 0.75
SH3PXD2BA1X283 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 FEM1AP4-201ENST00000443167 1987 ntBASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 AL356740.2-201ENST00000601559 647 ntBASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 AC026471.6-201ENST00000622954 1905 ntBASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SH3PXD2BA1X283 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3PXD2BA1X283 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH3PXD2BA1X283 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3PXD2BA1X283 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3PXD2BA1X283 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH3PXD2BA1X283 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3PXD2BA1X283 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.69■□□□□ 0.74
SH3PXD2BA1X283 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3PXD2BA1X283 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.69■□□□□ 0.74
SH3PXD2BA1X283 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.69■□□□□ 0.74
SH3PXD2BA1X283 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3PXD2BA1X283 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SH3PXD2BA1X283 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3PXD2BA1X283 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 AC006455.2-201ENST00000429931 906 ntBASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 OR7E47P-201ENST00000546390 1422 ntBASIC19.68■□□□□ 0.74
SH3PXD2BA1X283 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 LINC01006-201ENST00000333319 2292 ntBASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 pRNA.6-201ENST00000610482 90 ntBASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 pRNA.5-201ENST00000612139 90 ntBASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 pRNA.11-201ENST00000618423 90 ntBASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 pRNA.13-201ENST00000619112 90 ntBASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3PXD2BA1X283 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms