Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 SUDS3P1-201ENST00000505831 966 ntBASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 AC055733.4-201ENST00000638462 1354 ntBASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TRBV6-4A0A1B0GX49 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 AC012414.1-201ENST00000556676 535 ntBASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 AL354811.1-201ENST00000610286 706 ntBASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV6-4A0A1B0GX49 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 AC142381.2-201ENST00000566120 298 ntBASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-4A0A1B0GX49 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-4A0A1B0GX49 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms