Protein–RNA interactions for Protein: A0A1B0GTU2

CTXND1, Cortexin domain-containing 1, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTXND1A0A1B0GTU2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTXND1A0A1B0GTU2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTXND1A0A1B0GTU2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTXND1A0A1B0GTU2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.62■□□□□ 0.25
CTXND1A0A1B0GTU2 OR7E47P-201ENST00000546390 1422 ntBASIC16.62■□□□□ 0.25
CTXND1A0A1B0GTU2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 AC006128.1-201ENST00000624704 1661 ntBASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTXND1A0A1B0GTU2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTXND1A0A1B0GTU2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 AL391422.3-201ENST00000603791 2761 ntBASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 MIR4449-201ENST00000578365 66 ntBASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 AFG3L1P-217ENST00000557444 2447 ntBASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CTXND1A0A1B0GTU2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTXND1A0A1B0GTU2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTXND1A0A1B0GTU2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.58■□□□□ 0.25
CTXND1A0A1B0GTU2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
CTXND1A0A1B0GTU2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.58■□□□□ 0.24
CTXND1A0A1B0GTU2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.58■□□□□ 0.24
CTXND1A0A1B0GTU2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTXND1A0A1B0GTU2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTXND1A0A1B0GTU2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.58■□□□□ 0.24
CTXND1A0A1B0GTU2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.58■□□□□ 0.24
CTXND1A0A1B0GTU2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTXND1A0A1B0GTU2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTXND1A0A1B0GTU2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.58■□□□□ 0.24
CTXND1A0A1B0GTU2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CTXND1A0A1B0GTU2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.58■□□□□ 0.24
CTXND1A0A1B0GTU2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.58■□□□□ 0.24
CTXND1A0A1B0GTU2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTXND1A0A1B0GTU2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.57■□□□□ 0.24
CTXND1A0A1B0GTU2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.57■□□□□ 0.24
CTXND1A0A1B0GTU2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms