Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 AP006587.3-201ENST00000525742 1516 ntBASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 MIR4466-201ENST00000606121 54 ntBASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV4-1A0A0J9YWV2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV4-1A0A0J9YWV2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRBV4-1A0A0J9YWV2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.34■□□□□ 0.69
TRBV4-1A0A0J9YWV2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV4-1A0A0J9YWV2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV4-1A0A0J9YWV2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRBV4-1A0A0J9YWV2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV4-1A0A0J9YWV2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV4-1A0A0J9YWV2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.34■□□□□ 0.69
TRBV4-1A0A0J9YWV2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.34■□□□□ 0.69
TRBV4-1A0A0J9YWV2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV4-1A0A0J9YWV2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.34■□□□□ 0.69
TRBV4-1A0A0J9YWV2 AC011298.3-201ENST00000615796 283 ntBASIC19.34■□□□□ 0.69
TRBV4-1A0A0J9YWV2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV4-1A0A0J9YWV2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV4-1A0A0J9YWV2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
TRBV4-1A0A0J9YWV2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV4-1A0A0J9YWV2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV4-1A0A0J9YWV2 AC092667.1-201ENST00000434301 2586 ntBASIC19.33■□□□□ 0.69
TRBV4-1A0A0J9YWV2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 DUX4L19-201ENST00000557448 1267 ntBASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV4-1A0A0J9YWV2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms