Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV4A0A0C4DH28 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV4A0A0C4DH28 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV4A0A0C4DH28 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV4A0A0C4DH28 AC010542.4-201ENST00000563151 1910 ntBASIC15.17■□□□□ 0.02
TRGV4A0A0C4DH28 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV4A0A0C4DH28 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV4A0A0C4DH28 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV4A0A0C4DH28 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV4A0A0C4DH28 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.17■□□□□ 0.02
TRGV4A0A0C4DH28 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRGV4A0A0C4DH28 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 MIR939-201ENST00000401314 82 ntBASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRGV4A0A0C4DH28 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV4A0A0C4DH28 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 SMUG1P1-201ENST00000590640 811 ntBASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV4A0A0C4DH28 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 AL136967.2-201ENST00000623968 743 ntBASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.13■□□□□ 0.01
TRGV4A0A0C4DH28 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms