Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 MIR6084-201ENST00000622012 110 ntBASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TRBV7-1A0A0A6YYK4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV7-1A0A0A6YYK4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 LINC02228-203ENST00000641970 1355 ntBASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 AC123595.1-201ENST00000440769 1046 ntBASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV7-1A0A0A6YYK4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 AC079140.4-201ENST00000507448 529 ntBASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV7-1A0A0A6YYK4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 AC053503.5-201ENST00000601508 636 ntBASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 CLDN5-201ENST00000403084 2357 ntBASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV7-1A0A0A6YYK4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV7-1A0A0A6YYK4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms