Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV18A0A075B6X5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
TRAV18A0A075B6X5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV18A0A075B6X5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV18A0A075B6X5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV18A0A075B6X5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV18A0A075B6X5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAV18A0A075B6X5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRAV18A0A075B6X5 AC092028.1-203ENST00000608262 953 ntBASIC18.13■□□□□ 0.49
TRAV18A0A075B6X5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV18A0A075B6X5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRAV18A0A075B6X5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRAV18A0A075B6X5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAV18A0A075B6X5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV18A0A075B6X5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV18A0A075B6X5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV18A0A075B6X5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAV18A0A075B6X5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV18A0A075B6X5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 MTDHP2-201ENST00000601468 714 ntBASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV18A0A075B6X5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV18A0A075B6X5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV18A0A075B6X5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRAV18A0A075B6X5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAV18A0A075B6X5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV18A0A075B6X5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAV18A0A075B6X5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV18A0A075B6X5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms