Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC133065.4-201ENST00000570440 1159 ntBASIC11.78□□□□□ -0.52
LMO3Q8TAP4 ALOX12-AS1-203ENST00000570562 567 ntTSL 3 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 LINC02074-201ENST00000581028 569 ntTSL 4 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 LINC02074-202ENST00000584003 573 ntTSL 4 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 MIR4686-201ENST00000584128 76 ntBASIC11.78□□□□□ -0.52
LMO3Q8TAP4 AL136439.1-201ENST00000611364 862 ntTSL 3 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 LINC01702-203ENST00000635350 745 ntTSL 5 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 OGDH-205ENST00000444676 3309 ntTSL 5 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 LINC01550-206ENST00000556462 2098 ntTSL 2 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 SLAMF7-205ENST00000444090 2393 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 HERC2P4-205ENST00000566902 3957 ntBASIC11.78□□□□□ -0.52
LMO3Q8TAP4 NACA-201ENST00000356769 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 SRSF10-214ENST00000492112 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 AC004453.2-201ENST00000624861 2153 ntBASIC11.78□□□□□ -0.52
LMO3Q8TAP4 TP53-222ENST00000617185 2724 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 CANT1-202ENST00000392446 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 AL080317.2-201ENST00000607386 1385 ntBASIC11.78□□□□□ -0.52
LMO3Q8TAP4 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 CALU-206ENST00000542996 4225 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 TTYH2-202ENST00000441391 3661 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LMO3Q8TAP4 EPHA6-201ENST00000389672 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LMO3Q8TAP4 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
LMO3Q8TAP4 AC124303.2-201ENST00000623883 1449 ntBASIC11.77□□□□□ -0.52
LMO3Q8TAP4 PLEKHS1-201ENST00000354462 3403 ntTSL 5 BASIC11.77□□□□□ -0.52
LMO3Q8TAP4 ARNT2-201ENST00000303329 6558 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
LMO3Q8TAP4 ITGB6-205ENST00000428609 2576 ntTSL 2 BASIC11.77□□□□□ -0.52
LMO3Q8TAP4 KCTD1-206ENST00000579973 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LMO3Q8TAP4 EFL1-202ENST00000359445 3470 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LMO3Q8TAP4 DLD-201ENST00000205402 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LMO3Q8TAP4 CHERP-203ENST00000546361 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LMO3Q8TAP4 PHTF2-203ENST00000307305 4793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LMO3Q8TAP4 PRKAG2-201ENST00000287878 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LMO3Q8TAP4 TCF21-201ENST00000237316 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LMO3Q8TAP4 IGSF1-203ENST00000370901 1820 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LMO3Q8TAP4 ZCCHC11-202ENST00000355809 2152 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 BCL2L11-218ENST00000615946 5026 ntTSL 5 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 BCL2L11-220ENST00000620862 5044 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 BCL2L13-207ENST00000418951 5062 ntTSL 3 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 CD300LG-201ENST00000293396 988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 PILRA-202ENST00000350573 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 TCEAL1-202ENST00000372625 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 ENO1-IT1-201ENST00000414948 744 ntTSL 5 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 LINC01076-201ENST00000435725 302 ntTSL 3 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 HNRNPA1P15-201ENST00000444886 960 ntBASIC11.77□□□□□ -0.53
LMO3Q8TAP4 SLC25A5P1-201ENST00000450250 898 ntBASIC11.77□□□□□ -0.53
LMO3Q8TAP4 DDX11L1-201ENST00000450305 632 ntBASIC11.77□□□□□ -0.53
LMO3Q8TAP4 AL157902.1-203ENST00000456126 442 ntTSL 3 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 FAM173B-205ENST00000510047 1160 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 AC021678.2-201ENST00000521731 887 ntTSL 2 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 AP001775.1-201ENST00000532608 586 ntBASIC11.77□□□□□ -0.53
LMO3Q8TAP4 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 AC104316.2-201ENST00000559049 326 ntTSL 3 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 OAZ2-205ENST00000559753 785 ntTSL 2 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 AC007389.1-201ENST00000606978 1117 ntTSL 5 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 AC021321.1-201ENST00000607397 1113 ntBASIC11.77□□□□□ -0.53
LMO3Q8TAP4 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC11.77□□□□□ -0.53
LMO3Q8TAP4 SRP54-AS1-205ENST00000636540 565 ntBASIC11.77□□□□□ -0.53
LMO3Q8TAP4 DIS3L2-201ENST00000273009 3201 ntTSL 2 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 ZNF438-206ENST00000442986 3245 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 FDFT1-225ENST00000622850 1987 ntTSL 2 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 PPP6R3-226ENST00000534534 2968 ntTSL 2 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 PIK3R3-201ENST00000262741 5609 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 P2RX6-202ENST00000413302 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 FAM193A-202ENST00000382839 4710 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 NID2-201ENST00000216286 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 RPL22-201ENST00000234875 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 CLN3-238ENST00000569430 3867 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 RAVER1-208ENST00000617231 3501 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 HAUS8-203ENST00000593360 3176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 PRKCA-AS1-203ENST00000584715 2113 ntTSL 2 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 KLK7-205ENST00000595820 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 CCNYL2-201ENST00000472090 1440 ntBASIC11.77□□□□□ -0.53
LMO3Q8TAP4 MERTK-203ENST00000421804 3600 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 ZMYM5-201ENST00000337963 3268 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LMO3Q8TAP4 CNOT4-203ENST00000361528 2215 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 AC079465.1-201ENST00000416046 3361 ntTSL 2 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 C1orf94-202ENST00000488417 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 AC012368.1-206ENST00000451350 1504 ntTSL 5 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 RAD51B-205ENST00000471583 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 GAS2L3-205ENST00000547754 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 AC024651.1-201ENST00000561121 1963 ntTSL 3 BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 AC034229.3-201ENST00000606203 2436 ntBASIC11.76□□□□□ -0.53
LMO3Q8TAP4 TCN2-201ENST00000215838 2535 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LMO3Q8TAP4 AC233701.1-201ENST00000571452 4204 ntTSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms