Protein–RNA interactions for Protein: Q9Y5L0

TNPO3, Transportin-3, humanhuman

Known RBP Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3Q9Y5L0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TNPO3Q9Y5L0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.67■□□□□ 0.9
TNPO3Q9Y5L0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.67■□□□□ 0.9
TNPO3Q9Y5L0 AC099791.1-201ENST00000416440 715 ntBASIC20.67■□□□□ 0.9
TNPO3Q9Y5L0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.67■□□□□ 0.9
TNPO3Q9Y5L0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNPO3Q9Y5L0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNPO3Q9Y5L0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNPO3Q9Y5L0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
TNPO3Q9Y5L0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNPO3Q9Y5L0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNPO3Q9Y5L0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNPO3Q9Y5L0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNPO3Q9Y5L0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TNPO3Q9Y5L0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.64■□□□□ 0.9
TNPO3Q9Y5L0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TNPO3Q9Y5L0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNPO3Q9Y5L0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TNPO3Q9Y5L0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.64■□□□□ 0.89
TNPO3Q9Y5L0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.64■□□□□ 0.89
TNPO3Q9Y5L0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.64■□□□□ 0.89
TNPO3Q9Y5L0 AL024507.2-201ENST00000606070 2574 ntBASIC20.64■□□□□ 0.89
TNPO3Q9Y5L0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.64■□□□□ 0.89
TNPO3Q9Y5L0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNPO3Q9Y5L0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNPO3Q9Y5L0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 TSPY26P-201ENST00000476365 1326 ntBASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 AL355001.2-201ENST00000620617 1191 ntBASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 AC105233.4-201ENST00000642045 216 ntBASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNPO3Q9Y5L0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 AF106564.1-201ENST00000607058 2553 ntBASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNPO3Q9Y5L0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 RASA4CP-201ENST00000424092 1398 ntBASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 AP001330.3-201ENST00000520123 633 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms