Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
PCDHB9Q9Y5E1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB9Q9Y5E1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB9Q9Y5E1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 AC026471.6-201ENST00000622954 1905 ntBASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB9Q9Y5E1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB9Q9Y5E1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB9Q9Y5E1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB9Q9Y5E1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PCDHB9Q9Y5E1 AP004607.4-201ENST00000530158 1459 ntBASIC21.54■■□□□ 1.04
PCDHB9Q9Y5E1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB9Q9Y5E1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB9Q9Y5E1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDHB9Q9Y5E1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDHB9Q9Y5E1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHB9Q9Y5E1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB9Q9Y5E1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB9Q9Y5E1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB9Q9Y5E1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 KRT18P61-201ENST00000585825 1298 ntBASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB9Q9Y5E1 C11orf96-202ENST00000528572 1834 ntBASIC21.52■■□□□ 1.04
PCDHB9Q9Y5E1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHB9Q9Y5E1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB9Q9Y5E1 KRT18P11-201ENST00000435214 1283 ntBASIC21.52■■□□□ 1.04
PCDHB9Q9Y5E1 CROCCP5-201ENST00000436658 830 ntBASIC21.52■■□□□ 1.04
PCDHB9Q9Y5E1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB9Q9Y5E1 AC079140.4-201ENST00000507448 529 ntBASIC21.52■■□□□ 1.04
PCDHB9Q9Y5E1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PCDHB9Q9Y5E1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB9Q9Y5E1 AC004854.2-201ENST00000608450 1441 ntBASIC21.52■■□□□ 1.04
PCDHB9Q9Y5E1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB9Q9Y5E1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 NCF1B-203ENST00000435988 1254 ntBASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB9Q9Y5E1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 GPX1P1-201ENST00000388829 606 ntBASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 CD99P1-205ENST00000527459 561 ntBASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB9Q9Y5E1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB9Q9Y5E1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB9Q9Y5E1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB9Q9Y5E1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB9Q9Y5E1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PCDHB9Q9Y5E1 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHB9Q9Y5E1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB9Q9Y5E1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
PCDHB9Q9Y5E1 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms