Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 AC133637.1-201ENST00000624115 1537 ntBASIC18.95■□□□□ 0.62
EXOSC1Q9Y3B2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EXOSC1Q9Y3B2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 AL451085.2-201ENST00000605085 799 ntBASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 AC241377.3-202ENST00000626088 1088 ntBASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 AC241585.3-202ENST00000628937 1088 ntBASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 AC245100.8-202ENST00000629247 1058 ntBASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EXOSC1Q9Y3B2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 AC087239.1-201ENST00000622671 572 ntBASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EXOSC1Q9Y3B2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 AL034346.1-201ENST00000568244 1277 ntBASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 Z92544.1-202ENST00000571933 1220 ntBASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
EXOSC1Q9Y3B2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EXOSC1Q9Y3B2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EXOSC1Q9Y3B2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms