Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHA4Q9UN74 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA4Q9UN74 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA4Q9UN74 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA4Q9UN74 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA4Q9UN74 MIR935-201ENST00000401179 91 ntBASIC24.3■■□□□ 1.48
PCDHA4Q9UN74 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA4Q9UN74 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHA4Q9UN74 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.3■■□□□ 1.48
PCDHA4Q9UN74 AC053503.5-201ENST00000601508 636 ntBASIC24.3■■□□□ 1.48
PCDHA4Q9UN74 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHA4Q9UN74 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHA4Q9UN74 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA4Q9UN74 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA4Q9UN74 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA4Q9UN74 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA4Q9UN74 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.29■■□□□ 1.48
PCDHA4Q9UN74 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
PCDHA4Q9UN74 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA4Q9UN74 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA4Q9UN74 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHA4Q9UN74 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA4Q9UN74 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 AP004607.4-201ENST00000530158 1459 ntBASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA4Q9UN74 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 KRT18P61-201ENST00000585825 1298 ntBASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 AC004854.2-201ENST00000608450 1441 ntBASIC24.27■■□□□ 1.48
PCDHA4Q9UN74 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
PCDHA4Q9UN74 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA4Q9UN74 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA4Q9UN74 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
PCDHA4Q9UN74 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.26■■□□□ 1.47
PCDHA4Q9UN74 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
PCDHA4Q9UN74 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDHA4Q9UN74 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.26■■□□□ 1.47
PCDHA4Q9UN74 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA4Q9UN74 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDHA4Q9UN74 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA4Q9UN74 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
PCDHA4Q9UN74 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA4Q9UN74 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHA4Q9UN74 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms